RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 FBXO39Q8N4B4 442 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 SLC38A9Q8NBW4 561 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 LPAR1Q92633 364 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 TAAR8Q969N4 342 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 RHBDF1Q96CC6 855 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 ORAI1Q96D31 301 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 GFI1Q99684 422 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 MMTAG2Q9BU76 263 aaKnown RBP4.99□□□□□ -1.61
SCFD1-209ENST00000553280 ABHD6Q9BV23 337 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 FAM234AQ9H0X4 552 aa4.99□□□□□ -1.61
SCFD1-209ENST00000553280 CNOT10Q9H9A5 744 aaKnown RBP4.99□□□□□ -1.61
SCFD1-209ENST00000553280 COPS7BQ9H9Q2 264 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-209ENST00000553280 TRAV34A0A0B4J273 112 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 A0A0B4J293 547 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 TIMM23O14925 209 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 ZNF217O75362 1048 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 RBMXL2O75526 392 aaKnown RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 SIX3O95343 332 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 PENKP01210 267 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 TCEA1P23193 301 aaKnown RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 DNASE1P24855 282 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 HNRNPH2P55795 449 aaKnown RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 RBPJQ06330 500 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 TRAF1Q13077 416 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 GPR18Q14330 331 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 MEP1AQ16819 746 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 Q4G0T1 1027 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 PLA2G4FQ68DD2 849 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 KCTD18Q6PI47 426 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 SLC36A4Q6YBV0 504 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 CTU1Q7Z7A3 348 aaKnown RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 CENPVQ7Z7K6 275 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 AFAP1Q8N556 730 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 PCDH20Q8N6Y1 951 aaKnown RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 EMC1Q8N766 993 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 IQUBQ8NA54 791 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 C7orf57Q8NEG2 295 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 C16orf52Q8NHV5 167 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 LRRC3BQ96PB8 259 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 SLC22A12Q96S37 553 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 EGFL8Q99944 293 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 KXD1Q9BQD3 176 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 MRPL9Q9BYD2 267 aaKnown RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 C17orf75Q9HAS0 396 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 PRMT7Q9NVM4 692 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-209ENST00000553280 HEY2Q9UBP5 337 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 DNAJB9Q9UBS3 223 aa4.98□□□□□ -1.61
SCFD1-209ENST00000553280 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
SCFD1-209ENST00000553280 A0A1W2PPM1 405 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 ANXA2P2A6NMY6 339 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 FAM90A26D6RGX4 464 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 VWA5AO00534 786 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 HS3ST1O14792 307 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 DDNO94850 711 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-209ENST00000553280 BAG2O95816 211 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 CYP1A2P05177 515 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 CELA2AP08217 269 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 FGF2P09038 288 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 ATP6V1B1P15313 513 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 SP100P23497 879 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-209ENST00000553280 PCGF2P35227 344 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 LIMK1P53667 647 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 TUBB2AQ13885 445 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 MELKQ14680 651 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 E2F5Q15329 346 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 ZDHHC20Q5W0Z9 365 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 ZNF595Q8IYB9 648 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 CCAR2Q8N163 923 aaKnown RBP4.97□□□□□ -1.61
SCFD1-209ENST00000553280 GCSAMQ8N6F7 178 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 ARFGAP1Q8N6T3 406 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 MIGA1Q8NAN2 632 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 MSANTD4Q8NCY6 345 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 TBC1D16Q8TBP0 767 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 WDR20Q8TBZ3 569 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 WFIKKN2Q8TEU8 576 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 DDB2Q92466 427 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 RND1Q92730 232 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 NXNL1Q96CM4 212 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 URB1-AS1Q96HZ7 61 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 MS4A10Q96PG2 267 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 SEMA3CQ99985 751 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 FERMT1Q9BQL6 677 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 MGME1Q9BQP7 344 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 TUBB2BQ9BVA1 445 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 SPRY4Q9C004 299 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 KRCC1Q9NPI7 259 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-209ENST00000553280 EQTNQ9NQ60 294 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 TINAGQ9UJW2 476 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 HS3ST3B1Q9Y662 390 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 POMT1Q9Y6A1 747 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 RPGRIP1LQ68CZ1 1315 aa4.97□□□□□ -1.61
SCFD1-209ENST00000553280 IGHV4-28A0A0C4DH34 117 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 ARHGEF37A1IGU5 675 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 GOLGA6L9A6NEM1 432 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 OR6C76A6NM76 312 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 J3QR06 171 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 ASAP2O43150 1006 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 NDUFS7O75251 213 aa4.96□□□□□ -1.62
SCFD1-209ENST00000553280 TOMM70O94826 608 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms