RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ANKRD54Q6NXT1 300 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM270Q6UE05 265 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 FAM198BQ6UWH4 519 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 TPRG1Q6ZUI0 275 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 AMIGO2Q86SJ2 522 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 CAMK1DQ8IU85 385 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 CLYBLQ8N0X4 340 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 OR7G3Q8NG95 312 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 ERGIC1Q969X5 290 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 SEPHS2Q99611 448 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 KATNB1Q9BVA0 655 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 FZD8Q9H461 694 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 ESRP2Q9H6T0 727 aaKnown RBP5.73□□□□□ -1.49
SCFD1-208ENST00000553278 TUFT1Q9NNX1 390 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 SMPD4Q9NXE4 827 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 ACSL5Q9ULC5 683 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 STMND1H3BQB6 276 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 TRIM77I1YAP6 450 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 CAPN9O14815 690 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 KCNK5O95279 499 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 RLN1P04808 185 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 AVPR1AP37288 418 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 ME1P48163 572 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 SLC12A3P55017 1021 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 YBEYP58557 167 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-208ENST00000553278 ST8SIA6P61647 398 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 DGCR2P98153 550 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 MYLK3Q32MK0 819 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 KBTBD12Q3ZCT8 623 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 SLC9C1Q4G0N8 1177 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 PRAMEF17Q5VTA0 474 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 ERICH6BQ5W0A0 696 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 ZDHHC20Q5W0Z9 365 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 PATL1Q86TB9 770 aaKnown RBP5.72□□□□□ -1.49
SCFD1-208ENST00000553278 C4orf19Q8IY42 314 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 KDM1BQ8NB78 822 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 ANKRD20A12PQ8NF67 263 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 WDR20Q8TBZ3 569 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 APBB2Q92870 758 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 MIB2Q96AX9 1013 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 CACNG6Q9BXT2 260 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 ABCG4Q9H172 646 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 C1orf21Q9H246 121 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 IL17RBQ9NRM6 502 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 IARS2Q9NSE4 1012 aaKnown RBP5.72□□□□□ -1.49
SCFD1-208ENST00000553278 SLC9A2Q9UBY0 812 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 SERGEFQ9UGK8 458 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 POLLQ9UGP5 575 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 IL19Q9UHD0 177 aa5.72□□□□□ -1.49
SCFD1-208ENST00000553278 DBX1A6NMT0 343 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 FAM86B1E9PN63 330 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 CLDN4O14493 209 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 EIF3DO15371 548 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 PLPP2O43688 288 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 PRPSAP2O60256 369 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 EGFP01133 1207 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 INHBAP08476 426 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 FAM86B2P0C5J1 330 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 UROSP10746 265 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 GNAZP19086 355 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 IL10P22301 178 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 TNFRSF8P28908 595 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 CTSWP56202 376 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 KIAA1024LP59773 190 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 SNRPEP62304 92 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 CSNK2A1P68400 391 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 CDK3Q00526 305 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 PLP2Q04941 152 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF268Q14587 947 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 MVPQ14764 893 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 NR1D2Q14995 579 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 PTPN14Q15678 1187 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 UGCGQ16739 394 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 KLHL26Q53HC5 615 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 NSUN5P2Q63ZY6 315 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 ETFRF1Q6IPR1 90 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 TMEM71Q6P5X7 295 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 KCTD9Q7L273 389 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 RABEPKQ7Z6M1 372 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 TLK2Q86UE8 772 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 NLRP14Q86W24 1093 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 RTL3Q8N8U3 475 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 TEX45Q8NA69 505 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 CSNK2A3Q8NEV1 391 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 LILRB1Q8NHL6 650 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 SLC35F5Q8WV83 523 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 SLAMF9Q96A28 289 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 HNRNPABQ99729 332 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 MSTO1Q9BUK6 570 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 MOV10L1Q9BXT6 1211 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 WNT5BQ9H1J7 359 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 DNAJC17Q9NVM6 304 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 ANO10Q9NW15 660 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 TRPC4Q9UBN4 977 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 RAPGEFL1Q9UHV5 662 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 AGO2Q9UKV8 859 aaKnown RBP5.71□□□□□ -1.5
SCFD1-208ENST00000553278 CHKBQ9Y259 395 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 PCDHGA1Q9Y5H4 931 aa5.71□□□□□ -1.5
SCFD1-208ENST00000553278 YDJCA8MPS7 323 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms