RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 NAB1Q13506 487 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 KYNUQ16719 465 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 MAP9Q49MG5 647 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 PYCR3Q53H96 274 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 RD3Q7Z3Z2 195 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 TRIM74Q86UV6 250 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 SLC26A11Q86WA9 606 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 CNTN4Q8IWV2 1026 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 OR1E3Q8WZA6 343 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 TSACCQ96A04 125 aaPredicted RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 OR2M4Q96R27 311 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 WDR83Q9BRX9 315 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 TRIM56Q9BRZ2 755 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 GTPBP2Q9BX10 602 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 FGF22Q9HCT0 170 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 IARS2Q9NSE4 1012 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 TXNDC16Q9P2K2 825 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 APOBEC3BQ9UH17 382 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 FBXO5Q9UKT4 447 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 SUFUQ9UMX1 484 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 COMMD10Q9Y6G5 202 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 OAS3Q9Y6K5 1087 aaKnown RBP16.99■□□□□ 0.31
ITGA5-213ENST00000553071 CSNK1G3Q9Y6M4 447 aa16.99■□□□□ 0.31
ITGA5-213ENST00000553071 WDFY4Q6ZS81 3184 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 DNAJC6O75061 913 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 ESR1P03372 595 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 ERVK-10P10266 1014 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 RPS3P23396 243 aaKnown RBP eCLIP16.98■□□□□ 0.314e-18■■■□□ 15.2
ITGA5-213ENST00000553071 SSTR1P30872 391 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 PI4KAP42356 2102 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 CDKN1CP49918 316 aaPredicted RBP16.98■□□□□ 0.31
ITGA5-213ENST00000553071 PMS2P54278 862 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 BNC1Q01954 994 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 ILF3Q12906 894 aaKnown RBP eCLIP16.98■□□□□ 0.31
ITGA5-213ENST00000553071 CCDC6Q16204 474 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 INAVAQ3KP66 663 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 AASDHQ4L235 1098 aaPredicted RBP16.98■□□□□ 0.31
ITGA5-213ENST00000553071 BCL7AQ4VC05 210 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 EMBQ6PCB8 327 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 LVRNQ6Q4G3 990 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 TMEM220Q6QAJ8 160 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 PRR23CQ6ZRP0 262 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 TRAPPC5Q8IUR0 188 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 RASGEF1AQ8N9B8 481 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 PARD6BQ9BYG5 372 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 GSDMCQ9BYG8 508 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 CCDC68Q9H2F9 335 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 DNAAF2Q9NVR5 837 aaKnown RBP16.98■□□□□ 0.31
ITGA5-213ENST00000553071 GNPTGQ9UJJ9 305 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 RAB21Q9UL25 225 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 CORO1CQ9ULV4 474 aaPredicted RBP16.98■□□□□ 0.31
ITGA5-213ENST00000553071 GPSM3Q9Y4H4 160 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 PLXNA2O75051 1894 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 KNL1Q8NG31 2342 aa16.98■□□□□ 0.31
ITGA5-213ENST00000553071 TNRC6BQ9UPQ9 1833 aaKnown RBP16.98■□□□□ 0.31
ITGA5-213ENST00000553071 C17orf113A0A1B0GUU1 675 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 TCRBV9S1A1TA0A576 114 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 LNP1A1A4G5 178 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 GOLGA8KD6RF30 607 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 GOLGA8TH3BQL2 631 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 KPNA5O15131 536 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 GPR39O43194 453 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 PCDHGA12O60330 932 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 MTX2O75431 263 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 FTH1P02794 183 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 GNPDA1P46926 289 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 LEPRP48357 1165 aaKnown RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 POLD2P49005 469 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 GPX6P59796 221 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 VSNL1P62760 191 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 PLOD1Q02809 727 aaPredicted RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 TPRG1LQ5T0D9 272 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 TEDDM1Q5T9Z0 273 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 KDM7AQ6ZMT4 941 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 MARK2Q7KZI7 788 aaKnown RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 GKN2Q86XP6 184 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 MINDY1Q8N5J2 469 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 C2CD4AQ8NCU7 369 aaPredicted RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 LINC00615Q96LM1 132 aaPredicted RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 PANX3Q96QZ0 392 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 CYTH2Q99418 400 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 CCDC77Q9BR77 488 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 TIMM29Q9BSF4 260 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 CDC42EP4Q9H3Q1 356 aaKnown RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 PLAC1Q9HBJ0 212 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 ARFGAP3Q9NP61 516 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 TMEM9BQ9NQ34 198 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 NINJ2Q9NZG7 142 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 MARCH4Q9P2E8 410 aaPredicted RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 DOLKQ9UPQ8 538 aa16.97■□□□□ 0.31
ITGA5-213ENST00000553071 V9GYY5 206 aaPredicted RBP16.97■□□□□ 0.31
ITGA5-213ENST00000553071 A0A087WUV0 522 aaPredicted RBP16.96■□□□□ 0.31
ITGA5-213ENST00000553071 TPP1O14773 563 aa16.96■□□□□ 0.31
ITGA5-213ENST00000553071 PIAS2O75928 621 aa16.96■□□□□ 0.31
ITGA5-213ENST00000553071 S1PR4O95977 384 aa16.96■□□□□ 0.31
ITGA5-213ENST00000553071 ALPPL2P10696 532 aa16.96■□□□□ 0.31
ITGA5-213ENST00000553071 SLC1A2P43004 574 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms