RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 EGFP01133 1207 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 TROVE2P10155 538 aaKnown RBP eCLIP11.15□□□□□ -0.62
CACNB3-224ENST00000552812 TFEBP19484 476 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 ATP5F1P24539 256 aaPredicted RBP11.15□□□□□ -0.62
CACNB3-224ENST00000552812 CA5AP35218 305 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 CLCN7P51798 805 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 SEC13P55735 322 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 MRPS21P82921 87 aaKnown RBP11.15□□□□□ -0.62
CACNB3-224ENST00000552812 ACOX1Q15067 660 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 PON2Q15165 354 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 CRY1Q16526 586 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 LEXMQ3ZCV2 418 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 FBXO43Q4G163 708 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 GPRC6AQ5T6X5 926 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 PIP5KL1Q5T9C9 394 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 LIPMQ5VYY2 423 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 ZNF776Q68DI1 518 aaPredicted RBP11.15□□□□□ -0.62
CACNB3-224ENST00000552812 CGB2Q6NT52 195 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 ISCA2Q86U28 154 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 NLRP8Q86W28 1048 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 IL17RCQ8NAC3 791 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 DDHD1Q8NEL9 900 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 SCAMP4Q969E2 229 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 PANX3Q96QZ0 392 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 PLCD4Q9BRC7 762 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 KCTD5Q9NXV2 234 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 KLHL14Q9P2G3 628 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 KLHL42Q9P2K6 505 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 CD84Q9UIB8 345 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 ITM2BQ9Y287 266 aa11.15□□□□□ -0.62
CACNB3-224ENST00000552812 TMEM114B3SHH9 223 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 CFAP99D6REC4 459 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 C3orf80F5H4A9 247 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 F8W8V4 182 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 NEMP1O14524 444 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 SRFP11831 508 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 FOSL2P15408 326 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 GM2AP17900 193 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 DRD3P35462 400 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 WASP42768 502 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 DNAJB13P59910 316 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 IL2P60568 153 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 DPTQ07507 201 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 CNTN1Q12860 1018 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 HSF5Q4G112 596 aaPredicted RBP11.15□□□□□ -0.63
CACNB3-224ENST00000552812 PRPF38BQ5VTL8 546 aaKnown RBP11.15□□□□□ -0.63
CACNB3-224ENST00000552812 ZCCHC23Q6ZST2 131 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 SIDT2Q8NBJ9 832 aaKnown RBP11.15□□□□□ -0.63
CACNB3-224ENST00000552812 GIMAP7Q8NHV1 300 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 KIAA1191Q96A73 305 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 FAM136AQ96C01 138 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 AP2M1Q96CW1 435 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 PDLIM5Q96HC4 596 aaKnown RBP11.15□□□□□ -0.63
CACNB3-224ENST00000552812 WRAP53Q9BUR4 548 aaKnown RBP11.15□□□□□ -0.63
CACNB3-224ENST00000552812 RIOK2Q9BVS4 552 aaKnown RBP11.15□□□□□ -0.63
CACNB3-224ENST00000552812 TRIM55Q9BYV6 548 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 ABCG8Q9H221 673 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 SLC2A4RGQ9NR83 387 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 LATS2Q9NRM7 1088 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 TMPRSS11EQ9UL52 423 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 ARL2BPQ9Y2Y0 163 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 FADS3Q9Y5Q0 445 aa11.15□□□□□ -0.63
CACNB3-224ENST00000552812 ERICH4A6NGS2 130 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 QSOX1O00391 747 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 MID1O15344 667 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 TSPAN6O43657 245 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 ZBTB14O43829 449 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 DLX3O60479 287 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 MAGEC1O60732 1142 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 RECQL5O94762 991 aaPredicted RBP11.14□□□□□ -0.63
CACNB3-224ENST00000552812 AP2A2O94973 939 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 SNUPNO95149 360 aaKnown RBP11.14□□□□□ -0.63
CACNB3-224ENST00000552812 TSPAN12O95859 305 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 OR56A5P0C7T3 313 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 C6P13671 934 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 SLC1A6P48664 564 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 COPAP53621 1224 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 NFKB2Q00653 900 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 B4GALNT1Q00973 533 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
CACNB3-224ENST00000552812 C2orf27AQ580R0 203 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 LDLRAP1Q5SW96 308 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 AGBL4Q5VU57 503 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 AADATQ8N5Z0 425 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 CLDN19Q8N6F1 224 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 STAG3L4Q8TBR4 150 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 CXorf40AQ8TE69 158 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 PPP4R1Q8TF05 950 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 BTN2A2Q8WVV5 523 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 INPP5DQ92835 1189 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 PTERQ96BW5 349 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 NUS1Q96E22 293 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 DCUN1D1Q96GG9 259 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 SLC30A3Q99726 388 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 UNKQ9C0B0 810 aaKnown RBP11.14□□□□□ -0.63
CACNB3-224ENST00000552812 ALG9Q9H6U8 611 aa11.14□□□□□ -0.63
CACNB3-224ENST00000552812 SPATS2LQ9NUQ6 558 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms