RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 NT5MQ9NPB1 228 aa8.34□□□□□ -1.07
CDK4-213ENST00000552713 SEPT11Q9NVA2 429 aaKnown RBP8.34□□□□□ -1.07
CDK4-213ENST00000552713 CHKBQ9Y259 395 aa8.34□□□□□ -1.07
CDK4-213ENST00000552713 SLC5A6Q9Y289 635 aa8.34□□□□□ -1.07
CDK4-213ENST00000552713 ZNF451Q9Y4E5 1061 aa8.34□□□□□ -1.07
CDK4-213ENST00000552713 ARHGAP10A1A4S6 786 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 ANKRD62A6NC57 917 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 OR5K4A6NMS3 321 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 OR52A4PA6NMU1 304 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 DPM1O60762 260 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 VIPP01282 170 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 MT-ND3P03897 115 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 PYGLP06737 847 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 EBLN1P0CF75 366 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 SLC2A4P14672 509 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 ZNF30P17039 623 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 LPOP22079 712 aaPredicted RBP8.33□□□□□ -1.08
CDK4-213ENST00000552713 IL4RP24394 825 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 RPL10P27635 214 aaKnown RBP8.33□□□□□ -1.08
CDK4-213ENST00000552713 IL1R2P27930 398 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 CAPZBP47756 277 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 HCAR3P49019 387 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 ITGA1P56199 1179 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 DSC2Q02487 901 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 MAMLD1Q13495 774 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 TUBB3Q13509 450 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 GPR18Q14330 331 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 TCP11X2Q5H9J9 407 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 FAM182AQ5T1J6 154 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 PRAMEF17Q5VTA0 474 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 ZNF517Q6ZMY9 492 aaPredicted RBP8.33□□□□□ -1.08
CDK4-213ENST00000552713 SYVN1Q86TM6 617 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 PHYKPLQ8IUZ5 450 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 AOPEPQ8N6M6 819 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 MLKLQ8NB16 471 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 INPP5DQ92835 1189 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 EID2BQ96D98 161 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 SLC41A2Q96JW4 573 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 AGPAT1Q99943 283 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 GPR87Q9BY21 358 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 SLC29A3Q9BZD2 475 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 UNKQ9C0B0 810 aaKnown RBP8.33□□□□□ -1.08
CDK4-213ENST00000552713 OR2AG1Q9H205 316 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 SLC40A1Q9NP59 571 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 SEMA5BQ9P283 1151 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 RARRES3Q9UL19 164 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 FARSAQ9Y285 508 aaKnown RBP8.33□□□□□ -1.08
CDK4-213ENST00000552713 DNAJC16Q9Y2G8 782 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 NTNG1Q9Y2I2 539 aa8.33□□□□□ -1.08
CDK4-213ENST00000552713 APCP25054 2843 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 ANKUB1A6NFN9 424 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 EIF3CLB5ME19 914 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 DDX3YO15523 660 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 LRCH4O75427 683 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 MTX2O75431 263 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 TMEM63AO94886 807 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 SPINT3P49223 89 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 CLCNKAP51800 687 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 DRG2P55039 364 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 RPS15P62841 145 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 SMTNL2Q2TAL5 461 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 KHDC1Q4VXA5 237 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 TDRD12Q587J7 1177 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 ZRANB3Q5FWF4 1079 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 CRB2Q5IJ48 1285 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 RALGPS1Q5JS13 557 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 MARC1Q5VT66 337 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 ACAD10Q6JQN1 1059 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 POLNQ7Z5Q5 900 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 ADGRG6Q86SQ4 1221 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 ZNF547Q8IVP9 402 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 TRIM48Q8IWZ4 208 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 TEX26Q8N6G2 289 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 SIDT2Q8NBJ9 832 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 TTC13Q8NBP0 860 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 MR1Q95460 341 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 EIF3CQ99613 913 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 SMAD5Q99717 465 aaKnown RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 MAP3K3Q99759 626 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 MLPHQ9BV36 600 aaPredicted RBP8.32□□□□□ -1.08
CDK4-213ENST00000552713 CARD9Q9H257 536 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 CHST8Q9H2A9 424 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 FAM83DQ9H4H8 585 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 PDE7BQ9NP56 450 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 TRIM10Q9UDY6 481 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 EPHA6Q9UF33 1036 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 WDR37Q9Y2I8 494 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 PCDHGB7Q9Y5F8 929 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 PDZD2O15018 2839 aa8.32□□□□□ -1.08
CDK4-213ENST00000552713 C1orf232A0A0U1RR37 186 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 TMEM191CA6NGB0 347 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 PDZK1P1A8MUH7 402 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 TMCO5BA8MYB1 307 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 F5H423 210 aaPredicted RBP8.31□□□□□ -1.08
CDK4-213ENST00000552713 MASP2O00187 686 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 CHUKO15111 745 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 PRPSAP2O60256 369 aa8.31□□□□□ -1.08
CDK4-213ENST00000552713 CAPN1P07384 714 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms