RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CDH7Q9ULB5 785 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 A0A1W2PPC1 479 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 LRRC3CA6NJW4 275 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 LINC01548A6NM66 108 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 HEPACAM2A8MVW5 462 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 J3KR12 359 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 MDM4O15151 490 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 NDUFS4O43181 175 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 LDB2O43679 373 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 PRAMEF11O60813 436 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF217O75362 1048 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 GCNT3O95395 438 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 IFNA2P01563 188 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 KLKB1P03952 638 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 THEGLP0DJG4 465 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CHRNB1P11230 501 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 G6PDP11413 515 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CYP11B2P19099 503 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 HRH2P25021 359 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CDC25CP30307 473 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 HNRNPH1P31943 449 aaKnown RBP4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 HSPA4P34932 840 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 AMPHP49418 695 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 NHLH1Q02575 133 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 KRT33BQ14525 404 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 EFNB3Q15768 340 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 C2orf76Q3KRA6 126 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 TMEM119Q4V9L6 283 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 FAM91A1Q658Y4 838 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 B3GNT6Q6ZMB0 384 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF782Q6ZMW2 699 aaPredicted RBP4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF66Q6ZN08 573 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 GBP6Q6ZN66 633 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CCDC190Q86UF4 302 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 AFAP1Q8N556 730 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 WDR20Q8TBZ3 569 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 SEPT1Q8WYJ6 367 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 ROBO4Q8WZ75 1007 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 SPSB1Q96BD6 273 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 ERLEC1Q96DZ1 483 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CAMK1GQ96NX5 476 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 MS4A10Q96PG2 267 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CHMP1AQ9HD42 196 aaPredicted RBP4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 IL1RAPL2Q9NP60 686 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 MID1IP1Q9NPA3 183 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 PDGFCQ9NRA1 345 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 CACNG4Q9UBN1 327 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 STK39Q9UEW8 545 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 PA2G4Q9UQ80 394 aaKnown RBP4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 PCDHGA1Q9Y5H4 931 aa4.01□□□□□ -1.77
LSM6P2-201ENST00000552208 A0A087X1B8 175 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TMEM221A6NGB7 291 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 EIF4E1BA6NMX2 242 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 DDX39AO00148 427 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 RTCAO00442 366 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF263O14978 683 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 OLFM2O95897 454 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 EEF2P13639 858 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 HLA-DPA1P20036 260 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 UGT1A1P22309 533 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 SP100P23497 879 aaPredicted RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 TKTP29401 623 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 CASP3P42574 277 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 MATR3P43243 847 aaKnown RBP eCLIP4□□□□□ -1.77
LSM6P2-201ENST00000552208 CRKLP46109 303 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 FASLGP48023 281 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 RASSF2P50749 326 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 PROK1P58294 105 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 SELENOVP59797 346 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 CSNK2A1P68400 391 aaPredicted RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 MZT1Q08AG7 82 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 WASHC5Q12768 1159 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 MELKQ14680 651 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 SMN1Q16637 294 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 RNASEH2BQ5TBB1 312 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 FRG2Q64ET8 278 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 FAM109BQ6ICB4 259 aaPredicted RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 FIGLAQ6QHK4 219 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 PCSK4Q6UW60 755 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 NHLRC1Q6VVB1 395 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 SLC16A12Q6ZSM3 486 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF534Q76KX8 674 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 MFN1Q8IWA4 741 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TIGD4Q8IY51 512 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 CSNK2A3Q8NEV1 391 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TBC1D16Q8TBP0 767 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TMEM174Q8WUU8 243 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 CCDC47Q96A33 483 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 RMDN2Q96LZ7 410 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 MUS81Q96NY9 551 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 SMC6Q96SB8 1091 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 FAM118BQ9BPY3 351 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 ACAT2Q9BWD1 397 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 POLDIP3Q9BY77 421 aaKnown RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 RAD21L1Q9H4I0 556 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TASP1Q9H6P5 420 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TMEM51Q9NW97 253 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 TTC7AQ9ULT0 858 aaPredicted RBP4□□□□□ -1.77
LSM6P2-201ENST00000552208 PCDHA12Q9UN75 941 aa4□□□□□ -1.77
LSM6P2-201ENST00000552208 A0A1W2PPQ1 181 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms