RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PTGDR2Q9Y5Y4 395 aa13.87□□□□□ -0.19
RAB3IP-216ENST00000552199 NPIPB15A6NHN6 443 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 A8MX80 341 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 NEDD8-MDP1E9PL57 170 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 FBP2O00757 339 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 MAP3K7O43318 606 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 RHOP08100 348 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SNRPB2P08579 225 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 ALDOCP09972 364 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 GPX3P22352 226 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 ACADVLP49748 655 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 THOP1P52888 689 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 TGFBIQ15582 683 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 GPR33Q49SQ1 333 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 CARD16Q5EG05 197 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 TPRG1Q6ZUI0 275 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 KBTBD6Q86V97 674 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 PHYKPLQ8IUZ5 450 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 PCDH20Q8N6Y1 951 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 IRF7Q92985 503 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 HGH1Q9BTY7 390 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 BBS2Q9BXC9 721 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 TLR9Q9NR96 1032 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 NUDT4Q9NZJ9 180 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 CRLS1Q9UJA2 301 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 PRSS21Q9Y6M0 314 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 ANKRD12Q6UB98 2062 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 NOTCH4Q99466 2003 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 TLL1O43897 1013 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 BNIP3LO60238 219 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 VPS4BO75351 444 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 CRCPO75575 148 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 POP4O95707 220 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 ESRRBO95718 433 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 LINC00032P0C843 101 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 PKNOX1P55347 436 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 STX1BP61266 288 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 ECT2LQ008S8 904 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 CDC16Q13042 620 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 LRP8Q14114 963 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 GRB7Q14451 532 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 MMEL1Q495T6 779 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 REP15Q6BDI9 236 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SYVN1Q86TM6 617 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 GPR26Q8NDV2 337 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 HIPK4Q8NE63 616 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 OR56A4Q8NGH8 313 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 PLEKHG4BQ96PX9 1271 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SLC25A23Q9BV35 468 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 NUSAP1Q9BXS6 441 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SPHK2Q9NRA0 654 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 CACNA2D2Q9NY47 1150 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SLCO3A1Q9UIG8 710 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SLC4A7Q9Y6M7 1214 aa13.86□□□□□ -0.19
RAB3IP-216ENST00000552199 SOBPA7XYQ1 873 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 AGAP14A8MT82 685 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 E2F3O00716 465 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 SLC25A14O95258 325 aaPredicted RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 UROSP10746 265 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 LBPP18428 481 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ITGB6P18564 788 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 XRCC1P18887 633 aaPredicted RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ME2P23368 584 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 PRDX3P30048 256 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 CCNHP51946 323 aaPredicted RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 PSME3P61289 254 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 RBBP7Q16576 425 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 PAOXQ6QHF9 649 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 MACC1Q6ZN28 852 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 RNF111Q6ZNA4 994 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 DPY19L3Q6ZPD9 716 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 USP45Q70EL2 814 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ADAMTSL2Q86TH1 951 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 FUNDC1Q8IVP5 155 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 NXPE1Q8N323 547 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 CLDN19Q8N6F1 224 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 LKAAEAR1Q8TD35 194 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 NAT14Q8WUY8 206 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 N4BP2L2Q92802 583 aaPredicted RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ESAMQ96AP7 390 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ZNF641Q96N77 438 aaPredicted RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 MCCC1Q96RQ3 725 aaPredicted RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 LINC00597Q9H2U6 94 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ZDHHC6Q9H6R6 413 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 GIMAP2Q9UG22 337 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 POLG2Q9UHN1 485 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 EIF2B4Q9UI10 523 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ZNF225Q9UK10 706 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 BTRCQ9Y297 605 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 ASB1Q9Y576 335 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 PCDHGA7Q9Y5G6 932 aa13.85□□□□□ -0.19
RAB3IP-216ENST00000552199 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms