RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TFDP3Q5H9I0 405 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 HABP4Q5JVS0 413 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 C6orf141Q5SZD1 244 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 FAM182AQ5T1J6 154 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 GRTP1Q5TC63 336 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 NXNL2Q5VZ03 156 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 RANBP10Q6VN20 620 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 NAPRTQ6XQN6 538 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 C15orf39Q6ZRI6 1047 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 HTR3DQ70Z44 454 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ZNF534Q76KX8 674 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 THAP5Q7Z6K1 395 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PTAR1Q7Z6K3 402 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 GPAT4Q86UL3 456 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ZBTB46Q86UZ6 589 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PIGZQ86VD9 579 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 UNC45BQ8IWX7 931 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 DNAJC10Q8IXB1 793 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 RIMKLAQ8IXN7 391 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 GPALPP1Q8IXQ4 340 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 SLC22A15Q8IZD6 547 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 NLGN4XQ8N0W4 816 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 SYNE4Q8N205 404 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 AADATQ8N5Z0 425 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 POC5Q8NA72 575 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 MARCH10Q8NA82 808 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 TXNDC5Q8NBS9 432 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 TMEM35BQ8NCS4 154 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 OR52H1Q8NGJ2 320 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 DNAJB8Q8NHS0 232 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 WDR48Q8TAF3 677 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 FAM110BQ8TC76 370 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ACTL9Q8TC94 416 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PPP1R13LQ8WUF5 828 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 CYB5D2Q8WUJ1 264 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 CANT1Q8WVQ1 401 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 HTRA1Q92743 480 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 SNAPC3Q92966 411 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 USP13Q92995 863 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 C18orf25Q96B23 403 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 NSUN4Q96CB9 384 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ASIC4Q96FT7 647 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 WBP1Q96G27 269 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 AHCYL2Q96HN2 611 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 HEXIM2Q96MH2 286 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 UROC1Q96N76 676 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PIGSQ96S52 555 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 HSD17B14Q9BPX1 270 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 FEM1AQ9BSK4 669 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 TEX13BQ9BXU2 312 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 RHOBTB2Q9BYZ6 727 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 DNAI2Q9GZS0 605 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PCDHAC1Q9H158 963 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 MUC13Q9H3R2 512 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ST6GALNAC4Q9H4F1 302 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 DUSP21Q9H596 190 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ERVMER34-1Q9H9K5 563 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PLEKHA5Q9HAU0 1116 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 GPRC5CQ9NQ84 441 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 RPRD1BQ9NQG5 326 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 HPS4Q9NQG7 708 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 FARSBQ9NSD9 589 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 RAB20Q9NX57 234 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PAQR5Q9NXK6 330 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 USE1Q9NZ43 259 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 LRP2BPQ9P2M1 347 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 IP6K2Q9UHH9 426 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 SFMBT1Q9UHJ3 866 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PGAP2Q9UHJ9 254 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 KLHL21Q9UJP4 597 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ZNF229Q9UJW7 825 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 GMEB2Q9UKD1 530 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 ELF5Q9UKW6 265 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 CAB39Q9Y376 341 aaPredicted RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 RAP2CQ9Y3L5 183 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 PCDHGB2Q9Y5G2 931 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 SNX13Q9Y5W8 968 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 COPG1Q9Y678 874 aaKnown RBP5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 DGKBQ9Y6T7 804 aa5.26□□□□□ -1.57
LSM3P2-201ENST00000551246 CNTNAP4Q9C0A0 1308 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 A0A0B4J203 849 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 IGKV6D-41A0A0C4DH26 115 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 SLC15A5A6NIM6 579 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CLDN24A6NM45 220 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TRPC5OSA6NMA1 111 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GOLGA8JA6NMD2 632 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 H0YIN7 160 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GOLGA8SH3BPF8 625 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 H3BQ06 376 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 INO80B-WBP1J3KQ70 363 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 SDHDO14521 159 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 B4GAT1O43505 415 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PRPSAP2O60256 369 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TBC1D4O60343 1298 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PPP1R11O60927 126 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PTP4A3O75365 173 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms