RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
NPAS3-209ENST00000551008 SNX2O60749 519 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 PRB1P04280 392 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 ZNF7P17097 686 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-209ENST00000551008 WT1P19544 449 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-209ENST00000551008 SLC19A1P41440 591 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 CTSCP53634 463 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 NFATC2Q13469 925 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 FAM151BQ6UXP7 276 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 GPR155Q7Z3F1 870 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 DTX1Q86Y01 620 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 BMPERQ8N8U9 685 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 DTX3LQ8TDB6 740 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 BLOC1S5Q8TDH9 187 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 NAT14Q8WUY8 206 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 USP7Q93009 1102 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
NPAS3-209ENST00000551008 SPATA13Q96N96 652 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 UBL7Q96S82 380 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-209ENST00000551008 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
NPAS3-209ENST00000551008 ANP32EQ9BTT0 268 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 TBC1D10AQ9BXI6 508 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 KLC4Q9NSK0 619 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 CPNE7Q9UBL6 633 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 ARL5AQ9Y689 179 aa12.84□□□□□ -0.35
NPAS3-209ENST00000551008 GPR89AB7ZAQ6 455 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 HGSO14964 777 aaPredicted RBP12.83□□□□□ -0.36
NPAS3-209ENST00000551008 ATXN7O15265 892 aaPredicted RBP12.83□□□□□ -0.36
NPAS3-209ENST00000551008 KCNN4O15554 427 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 SGTAO43765 313 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 VEGFDO43915 354 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 JMJD7P0C870 316 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 GPR89BP0CG08 455 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 SPAM1P38567 509 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 GEMP55040 296 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 GDF10P55107 478 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 XIAPP98170 497 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 KCTD11Q693B1 232 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 KIAA1328Q86T90 577 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 LRRTM4Q86VH4 590 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 ZFAND4Q86XD8 727 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 JAMLQ86YT9 394 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
NPAS3-209ENST00000551008 RASGEF1AQ8N9B8 481 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 DDHD1Q8NEL9 900 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 SLC35B2Q8TB61 432 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 TTC9Q92623 222 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 TMEM159Q96B96 161 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 HES6Q96HZ4 224 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 TIMM29Q9BSF4 260 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 SMOXQ9NWM0 555 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 OCIAD1Q9NX40 245 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 HACD3Q9P035 362 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 IMPACTQ9P2X3 320 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 WDR37Q9Y2I8 494 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 SLC30A1Q9Y6M5 507 aa12.83□□□□□ -0.36
NPAS3-209ENST00000551008 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
NPAS3-209ENST00000551008 GCN1Q92616 2671 aaKnown RBP12.83□□□□□ -0.36
NPAS3-209ENST00000551008 KIR2DS5A0A0G2JLQ3 304 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 A0A0G2JNG1 304 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 TEX51A0A1B0GUA7 166 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 LILRA5A6NI73 299 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 K7ENP7 123 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 KIR2DS3K7RE56 304 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 KMOO15229 486 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 ANXA9O76027 345 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 CDK14O94921 469 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 IPO7O95373 1038 aaKnown RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 METTL18O95568 372 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 MAPK10P53779 464 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 NAP1L1P55209 391 aaKnown RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 GPLD1P80108 840 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 TMEM115Q12893 351 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 TRA2AQ13595 282 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 PEX6Q13608 980 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 COL9A2Q14055 689 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 SPARCL1Q14515 664 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 KIR2DS5Q14953 304 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 INSCQ1MX18 579 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 GPRC6AQ5T6X5 926 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 TMEM71Q6P5X7 295 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 DARS2Q6PI48 645 aaKnown RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 INO80CQ6PI98 192 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 ABRAXAS1Q6UWZ7 409 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 FAM83HQ6ZRV2 1179 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 PEX26Q7Z412 305 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 ARHGAP22Q7Z5H3 698 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 CMKLR1Q99788 373 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 OSGEPL1Q9H4B0 414 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 FKBPLQ9UIM3 349 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms