RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF572Q7Z3I7 529 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TRMT11Q7Z4G4 463 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CDKL3Q8IVW4 592 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF610Q8N9Z0 462 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 MNS1Q8NEH6 495 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 OR52K2Q8NGK3 314 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 SLC35B2Q8TB61 432 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 ACTL9Q8TC94 416 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 WFDC5Q8TCV5 224 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TFB1MQ8WVM0 346 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 FAM3CQ92520 227 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 MAML1Q92585 1016 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 ISG20Q96AZ6 181 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 HMCESQ96FZ2 354 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 RUNDC3BQ96NL0 473 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 UHRF1Q96T88 793 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PSMB7Q99436 277 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 VAT1Q99536 393 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 HERPUD2Q9BSE4 406 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 SLC39A8Q9C0K1 460 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PDFQ9HBH1 243 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 USP36Q9P275 1121 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 FEZ2Q9UHY8 353 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 IPO11Q9UI26 975 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 VPS51Q9UID3 782 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 MUTYHQ9UIF7 546 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 SLC25A13Q9UJS0 675 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CDC23Q9UJX2 597 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 INTS6Q9UL03 887 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CLEC4EQ9ULY5 219 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PLA2G4CQ9UP65 541 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 SLC8A2Q9UPR5 921 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 DRG1Q9Y295 367 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 KIAA1549LQ6ZVL6 1849 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TCRBV7S2A1N4TA0A589 114 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 KANSL1LA0AUZ9 987 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 UBE2QL1A1L167 161 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 SHISA7A6NL88 538 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CAPN14A8MX76 684 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 PRRT4C9JH25 899 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CCDC188H7C350 402 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 K7EQS6 105 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 LIASO43766 372 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 ATG13O75143 517 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 PEX11BO96011 259 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 VSIG10L2P0DP72 767 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 RBP3P10745 1247 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CCNB1P14635 433 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 ACRV1P26436 265 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 STIP1P31948 543 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CHRNA3P32297 505 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 LSP1P33241 339 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 MAGEA9P43362 315 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 KIR2DL3P43628 341 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 RPS9P46781 194 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 FNTAP49354 379 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 SERPINH1P50454 418 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 EIF3EP60228 445 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 ST8SIA6P61647 398 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 IFI35P80217 286 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 MRPS21P82921 87 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 OTUD4Q01804 1114 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 KDSRQ06136 332 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 NSUN2Q08J23 767 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 SLC10A2Q12908 348 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 BYSLQ13895 437 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 SIX1Q15475 284 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 GEN1Q17RS7 908 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 MARC1Q5VT66 337 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 TMEM215Q68D42 235 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 AADACL2Q6P093 401 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 C4orf22Q6V702 233 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 C11orf74Q86VG3 221 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 C1orf210Q8IVY1 113 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CCDC13Q8IYE1 715 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 APCDD1Q8J025 514 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 BBS5Q8N3I7 341 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 TEX26Q8N6G2 289 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 PRELID2Q8N945 189 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CCNYQ8ND76 341 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 OR7D4Q8NG98 312 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 TTC8Q8TAM2 541 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 NSMCE1Q8WV22 266 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 SLCO2A1Q92959 643 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CLDN23Q96B33 292 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 RTP4Q96DX8 246 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF503Q96F45 646 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CELF6Q96J87 481 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 HIST1H2AHQ96KK5 128 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 PPP1R2P1Q96PQ5 205 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 PSKH2Q96QS6 385 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 HIST1H2AJQ99878 128 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 CIPCQ9C0C6 399 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 FBRSL1Q9HCM7 1045 aaKnown RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 EMC7Q9NPA0 242 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 UBA2Q9UBT2 640 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 ING1Q9UK53 422 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-213ENST00000550629 TRHDEQ9UKU6 1024 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms