RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PDPK2PQ6A1A2 396 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 LVRNQ6Q4G3 990 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 SYT10Q6XYQ8 523 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PPP1R21Q6ZMI0 780 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CCNI2Q6ZMN8 369 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 LDB1Q86U70 411 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PHYKPLQ8IUZ5 450 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 Q8N9G6 341 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 DNAAF3Q8N9W5 541 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 ATL2Q8NHH9 583 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 ZDHHC1Q8WTX9 485 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 SGF29Q96ES7 293 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CDKN2AIPNLQ96HQ2 116 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PWWP2AQ96N64 755 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 SRPK1Q96SB4 655 aaKnown RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 NRTNQ99748 197 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CCDC3Q9BQI4 270 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 DUSP23Q9BVJ7 150 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 ASB8Q9H765 288 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CHRAC1Q9NRG0 131 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 KLC4Q9NSK0 619 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 SMOXQ9NWM0 555 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 SYBUQ9NX95 663 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 MARCH4Q9P2E8 410 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 ANGPTL2Q9UKU9 493 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 DOLKQ9UPQ8 538 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 DNAJC16Q9Y2G8 782 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 WDR37Q9Y2I8 494 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PCDHB1Q9Y5F3 818 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PCDHGA1Q9Y5H4 931 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PRSS21Q9Y6M0 314 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 IGF2RP11717 2491 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 DMXL2Q8TDJ6 3036 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TRBV5-4A0A0C4DH59 114 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 OR2AG2A6NM03 316 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 E7EVH7 732 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 GOLGA8MH3BSY2 632 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TP73O15350 636 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 PSMD3O43242 534 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 B4GAT1O43505 415 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 SNX2O60749 519 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 BANF1O75531 89 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 CDK14O94921 469 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 CRTAMO95727 393 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 PYGLP06737 847 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TCP1P17987 556 aaKnown RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 ARNTP27540 789 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 NMBRP28336 390 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 FOXN2P32314 431 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TNNT3P45378 269 aaPredicted RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 LMAN1P49257 510 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 DRG2P55039 364 aaKnown RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 CFHR1Q03591 330 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 ACVR1Q04771 509 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 CDH17Q12864 832 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 ILF3Q12906 894 aaKnown RBP eCLIP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TARDBPQ13148 414 aaKnown RBP eCLIP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 DBN1Q16643 649 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF658BQ4V348 819 aaPredicted RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 C14orf28Q4W4Y0 310 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 B3GNT8Q7Z7M8 397 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 KLHL7Q8IXQ5 586 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 SDR16C5Q8N3Y7 309 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 ARL14Q8N4G2 192 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 GDAP1Q8TB36 358 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 DTX3LQ8TDB6 740 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 SLC37A2Q8TED4 501 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 HDAC10Q969S8 669 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 PPP1R2P1Q96PQ5 205 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TRIM51Q9BSJ1 452 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 GSDMCQ9BYG8 508 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 CDH19Q9H159 772 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 EIF2B3Q9NR50 452 aaKnown RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 RAD18Q9NS91 495 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 IL1RAPL1Q9NZN1 696 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 ATXN7L1Q9ULK2 861 aaPredicted RBP11.05□□□□□ -0.64
RAB5B-208ENST00000550283 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 SAR1BQ9Y6B6 198 aa11.05□□□□□ -0.64
RAB5B-208ENST00000550283 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 IGLV3-16A0A075B6K0 115 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 CTAGE9A4FU28 777 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 ERI2A8K979 691 aaKnown RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 H7C0S8 307 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 AGRPO00253 132 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NTN3O00634 580 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 OR1I1O60431 355 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF189O75820 626 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF7P17097 686 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 TPSB2P20231 275 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 RPL10P27635 214 aaKnown RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 PBLDP30039 288 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 OR1D5P58170 312 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NFE2L1Q14494 772 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 TPSAB1Q15661 275 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 SEPT7Q16181 437 aaKnown RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 ZRANB3Q5FWF4 1079 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 FNBP1LQ5T0N5 605 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NKAIN2Q5VXU1 208 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms