RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 AMZ1Q400G9 498 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 IGF2-ASQ6U949 168 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 LINC00523Q86TU6 105 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF547Q8IVP9 402 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 SNIP1Q8TAD8 396 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A7Q9HAW7 530 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A10Q9HAW8 530 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A8Q9HAW9 530 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 SARS2Q9NP81 518 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 ATXN7L1Q9ULK2 861 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 KCTD3Q9Y597 815 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 PCDHGA8Q9Y5G5 932 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 ADAMTS20P59510 1910 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 OR5K4A6NMS3 321 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 E7EVH7 732 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 PPM1DO15297 605 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 LDB2O43679 373 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 CEP104O60308 925 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 SRP72O76094 671 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 ITGALP20701 1170 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 MLLT3P42568 568 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 HHEXQ03014 270 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 EIF3IQ13347 325 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 MSLNQ13421 630 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 CCNG2Q16589 344 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 DRICH1Q6PGQ1 229 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 IYDQ6PHW0 289 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 PIM3Q86V86 326 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 OR13C4Q8NGS5 318 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF398Q8TD17 642 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF578Q96N58 590 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 ZMYND15Q9H091 742 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 THSD1Q9NS62 852 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 KCNK4Q9NYG8 393 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 PAK5Q9P286 719 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 SLC23A2Q9UGH3 650 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 DNAJC16Q9Y2G8 782 aa16.98■□□□□ 0.31
CHMP1A-208ENST00000550102 IGHV1OR21-1A0A087WYE8 117 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 A0A1W2PNU3 283 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 PDZK1P1A8MUH7 402 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 B4GAT1O43505 415 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 TLX3O43711 291 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 GAS8O95995 478 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 RBMS1P29558 406 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 CXCR5P32302 372 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 LMAN1P49257 510 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 ERVPABLB-1P60509 514 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 GPLD1P80108 840 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 POU6F1Q14863 301 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 LONRF2Q1L5Z9 754 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 PHF19Q5T6S3 580 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 FOXR1Q6PIV2 292 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 SLC9B2Q86UD5 537 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 SLITRK4Q8IW52 837 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 RASGEF1AQ8N9B8 481 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 FGF11Q92914 225 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 SH3KBP1Q96B97 665 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 ULK4Q96C45 1275 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF514Q96K75 400 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 DNAJC1Q96KC8 554 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 DCBLD2Q96PD2 775 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 SLC38A3Q99624 504 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 ASB8Q9H765 288 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 RDH14Q9HBH5 336 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 ASCL3Q9NQ33 180 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 PRDM8Q9NQV8 689 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 RAB6BQ9NRW1 208 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 CRLS1Q9UJA2 301 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 JRKLQ9Y4A0 524 aa16.97■□□□□ 0.31
CHMP1A-208ENST00000550102 CELSR3Q9NYQ7 3312 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 TRBV23OR9-2A0A075B6M9 112 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 A0A087WV48 116 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 PRR19A6NJB7 356 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 PLD2O14939 933 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 ZSCAN12O43309 604 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 DUX1O43812 170 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 TPH1P17752 444 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 MSH3P20585 1137 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 PCBP4P57723 403 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 TMPRSS15P98073 1019 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 XIAPP98170 497 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 ZFP36L1Q07352 338 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 CDH17Q12864 832 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 SEMA5AQ13591 1074 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 SEPT7Q16181 437 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 PPP1R21Q6ZMI0 780 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 RAB11FIP2Q7L804 512 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 TMPRSS9Q7Z410 1059 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 C11orf96Q7Z7L8 435 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF761Q86XN6 746 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 TRIM48Q8IWZ4 208 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 DNAAF3Q8N9W5 541 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 OR10G6Q8NH81 332 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 TMEM159Q96B96 161 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 DPYSL5Q9BPU6 564 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 NUDT22Q9BRQ3 303 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 KCNF1Q9H3M0 494 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 ETNK1Q9HBU6 452 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms