RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 ZNF624Q9P2J8 865 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 DNAJC16Q9Y2G8 782 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 WDR37Q9Y2I8 494 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZNF106Q9H2Y7 1883 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CCDC187A0A096LP49 1063 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 GLYATL1P3A0A0U1RQE8 302 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 STX7O15400 261 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 KRT86O43790 486 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZSCAN5DPP0CG00 497 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CCL4P13236 92 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 LPOP22079 712 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 RPL10P27635 214 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ACTN2P35609 894 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SLC19A1P41440 591 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 GRIA1P42261 906 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 GPR3P46089 330 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 FASLGP48023 281 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ARSDP51689 593 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CLCNKAP51800 687 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 UBE2IP63279 158 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 CLCA4Q14CN2 919 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 IGF2-ASQ6U949 168 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 RAB11FIP2Q7L804 512 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PHYKPLQ8IUZ5 450 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SPACA3Q8IXA5 215 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 FBXO39Q8N4B4 442 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 BEND7Q8N7W2 519 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TTC13Q8NBP0 860 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZNF398Q8TD17 642 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 DTX3LQ8TDB6 740 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 BRSK1Q8TDC3 778 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PMEPA1Q969W9 287 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 ZNF578Q96N58 590 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TBC1D10AQ9BXI6 508 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 TSGA10Q9BZW7 698 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 OGFRQ9NZT2 677 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
LETMD1-221ENST00000550100 SLC30A1Q9Y6M5 507 aa11.63□□□□□ -0.55
LETMD1-221ENST00000550100 PLD2O14939 933 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 KMOO15229 486 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 VEGFDO43915 354 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 POP7O75817 140 aaKnown RBP11.62□□□□□ -0.55
LETMD1-221ENST00000550100 CPNE6O95741 557 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 F3P13726 295 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 DRG2P55039 364 aaKnown RBP11.62□□□□□ -0.55
LETMD1-221ENST00000550100 ERVPABLB-1P60509 514 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 TLE3Q04726 772 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 SRSF6Q13247 344 aaKnown RBP11.62□□□□□ -0.55
LETMD1-221ENST00000550100 SQSTM1Q13501 440 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 PRPSAP1Q14558 356 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 RPS6KA1Q15418 735 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 SEPT7Q16181 437 aaKnown RBP11.62□□□□□ -0.55
LETMD1-221ENST00000550100 PHF19Q5T6S3 580 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 ARHGEF18Q6ZSZ5 1173 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 DET1Q7L5Y6 550 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 PDZD3Q86UT5 571 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 PIM3Q86V86 326 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 LRRTM4Q86VH4 590 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 TXLNBQ8N3L3 684 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 DDHD1Q8NEL9 900 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 GRAMD1AQ96CP6 724 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 SGF29Q96ES7 293 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 DNAJC1Q96KC8 554 aaKnown RBP11.62□□□□□ -0.55
LETMD1-221ENST00000550100 CCDC74BQ96LY2 380 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 OSGEPL1Q9H4B0 414 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 ETNK1Q9HBU6 452 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 SARS2Q9NP81 518 aaKnown RBP11.62□□□□□ -0.55
LETMD1-221ENST00000550100 KCNK4Q9NYG8 393 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.62□□□□□ -0.553e-7■■□□□ 13.6
LETMD1-221ENST00000550100 CPNE7Q9UBL6 633 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 PPP2R2CQ9Y2T4 447 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 PKP3Q9Y446 797 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 LOXL2Q9Y4K0 774 aa11.62□□□□□ -0.55
LETMD1-221ENST00000550100 CCDC78A2IDD5 438 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 GOLGA6L9A6NEM1 432 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 OR2AG2A6NM03 316 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 AGAP14A8MT82 685 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 GOLGA6L6A8MZA4 724 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 EFSO43281 561 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 SRP72O76094 671 aaKnown RBP11.61□□□□□ -0.55
LETMD1-221ENST00000550100 STK10O94804 968 aaKnown RBP11.61□□□□□ -0.55
LETMD1-221ENST00000550100 PRAMEF1O95521 474 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 PTMAP06454 111 aaKnown RBP11.61□□□□□ -0.55
LETMD1-221ENST00000550100 CCDC175P0C221 793 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 FGF3P11487 239 aaPredicted RBP11.61□□□□□ -0.55
LETMD1-221ENST00000550100 SLC5A2P31639 672 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 CXCR5P32302 372 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 ATRXP46100 2492 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 LIMK2P53671 638 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 HHEXQ03014 270 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 TGIF1Q15583 401 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 TMEM220Q6QAJ8 160 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 CLEC14AQ86T13 490 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 LILRA3Q8N6C8 439 aaPredicted RBP11.61□□□□□ -0.55
LETMD1-221ENST00000550100 GDAP1Q8TB36 358 aa11.61□□□□□ -0.55
LETMD1-221ENST00000550100 TMEM74Q96NL1 305 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms