RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 BUD23O43709 281 aaKnown RBP16.1■□□□□ 0.17
VPS29-207ENST00000549970 VEGFDO43915 354 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 ZNF7P17097 686 aaPredicted RBP16.1■□□□□ 0.17
VPS29-207ENST00000549970 HLA-DPA1P20036 260 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 SPAM1P38567 509 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 CLCNKAP51800 687 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 COPS2P61201 443 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 XRCC4Q13426 336 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 GTF2H3Q13889 308 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 LY6DQ14210 128 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 RAD9BQ6WBX8 426 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 GLT6D1Q7Z4J2 308 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 DTX1Q86Y01 620 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 ZNF547Q8IVP9 402 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 ACRBPQ8NEB7 543 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 ACTL9Q8TC94 416 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 VPS35Q96QK1 796 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 FSD1LQ9BXM9 530 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.1■□□□□ 0.17
VPS29-207ENST00000549970 B3GNT4Q9C0J1 378 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 SLC39A1Q9NY26 324 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 SCHIP1Q9P0W5 487 aaPredicted RBP16.1■□□□□ 0.17
VPS29-207ENST00000549970 KLHL3Q9UH77 587 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 TRHDEQ9UKU6 1024 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 REXO2Q9Y3B8 237 aaKnown RBP16.1■□□□□ 0.17
VPS29-207ENST00000549970 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 STMND1H3BQB6 276 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 GPR39O43194 453 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 FECHP22830 423 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 CTNNA2P26232 953 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 ARSDP51689 593 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 EPHA4P54764 986 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 UBE2IP63279 158 aaKnown RBP16.09■□□□□ 0.17
VPS29-207ENST00000549970 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
VPS29-207ENST00000549970 TMEM115Q12893 351 aaPredicted RBP16.09■□□□□ 0.17
VPS29-207ENST00000549970 WDR74Q6RFH5 385 aaPredicted RBP16.09■□□□□ 0.17
VPS29-207ENST00000549970 FAM151BQ6UXP7 276 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 TRAPPC5Q8IUR0 188 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 TRIM48Q8IWZ4 208 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 ZNF843Q8N446 348 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 AVL9Q8NBF6 648 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 WBP1Q96G27 269 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 FAM118BQ9BPY3 351 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 TIMM29Q9BSF4 260 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 OSBPL8Q9BZF1 889 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 SEMA4CQ9C0C4 833 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 LACRTQ9GZZ8 138 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 GBA3Q9H227 469 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 IL26Q9NPH9 171 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 HACD3Q9P035 362 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 IL17CQ9P0M4 197 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 PDP2Q9P2J9 529 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 PCDHGA3Q9Y5H0 932 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 B3GALT1Q9Y5Z6 326 aa16.09■□□□□ 0.17
VPS29-207ENST00000549970 CCDC66A2RUB6 948 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 PJA2O43164 708 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A9O60656 530 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 AGTP01019 485 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 VIPP01282 170 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A6P19224 532 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A1P22309 533 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A4P22310 534 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 RPL10P27635 214 aaKnown RBP16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A3P35503 534 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 GEMP55040 296 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 RWDD2BP57060 319 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 CHRNA6Q15825 494 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 ZDHHC20Q5W0Z9 365 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 AADACL2Q6P093 401 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 CDKL3Q8IVW4 592 aaPredicted RBP16.08■□□□□ 0.16
VPS29-207ENST00000549970 SGF29Q96ES7 293 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 CALR3Q96L12 384 aaKnown RBP16.08■□□□□ 0.16
VPS29-207ENST00000549970 TTC25Q96NG3 672 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 FERMT1Q9BQL6 677 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 GORASP1Q9BQQ3 440 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 FICDQ9BVA6 458 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 DDA1Q9BW61 102 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A7Q9HAW7 530 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A10Q9HAW8 530 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 UGT1A8Q9HAW9 530 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 ZNF624Q9P2J8 865 aaPredicted RBP16.08■□□□□ 0.16
VPS29-207ENST00000549970 TRIM10Q9UDY6 481 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 PKP3Q9Y446 797 aa16.08■□□□□ 0.16
VPS29-207ENST00000549970 GLYATL1P3A0A0U1RQE8 302 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 LILRA5A6NI73 299 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 BTNL10A8MVZ5 291 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 B4E171 279 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.07■□□□□ 0.16
VPS29-207ENST00000549970 ANXA9O76027 345 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 RBP3P10745 1247 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
VPS29-207ENST00000549970 WT1P19544 449 aaPredicted RBP16.07■□□□□ 0.16
VPS29-207ENST00000549970 PSMB4P28070 264 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 CA5AP35218 305 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 SLC19A1P41440 591 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 TSPAN7P41732 249 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 VAV2P52735 878 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 DRG2P55039 364 aaKnown RBP16.07■□□□□ 0.16
VPS29-207ENST00000549970 EIF3EP60228 445 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms