RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 PCDH8O95206 1070 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 SLC25A14O95258 325 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 SERPINE1P05121 402 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 ATP1B2P14415 290 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 CD1DP15813 335 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 KCNA4P22459 653 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 DGKAP23743 735 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 ATP5F1P24539 256 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 AKT1P31749 480 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 GMPRP36959 345 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 GLRBP48167 497 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 RGS4P49798 205 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 PGGT1BP53609 377 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 CCINQ13939 588 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 LRRC32Q14392 662 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 PCLAFQ15004 111 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 TECRLQ5HYJ1 363 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 AGBL4Q5VU57 503 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 USP30Q70CQ3 517 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 PIM3Q86V86 326 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 C10orf107Q8IVU9 208 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 ADHFE1Q8IWW8 467 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 RPLP0P6Q8NHW5 317 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 RHEBL1Q8TAI7 183 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 ANKRD49Q8WVL7 239 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 GLYATL1Q969I3 302 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 SIPA1Q96FS4 1042 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 PDLIM5Q96HC4 596 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 SHDQ96IW2 340 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 BOCQ9BWV1 1114 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 SARS2Q9NP81 518 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 OXSMQ9NWU1 459 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 XPR1Q9UBH6 696 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 FZD4Q9ULV1 537 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 MED16Q9Y2X0 877 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 A0A1W2PP55 124 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 EIF3FO00303 357 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 SMIM24O75264 130 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 TRIM16O95361 564 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 ACADMP11310 421 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 GM2AP17900 193 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 TFEBP19484 476 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 CA5AP35218 305 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 GPR1P46091 355 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 CLCN7P51798 805 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 RPS21P63220 83 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 AGERQ15109 404 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 IER5LQ5T953 404 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 KIAA1161Q6NSJ0 714 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 NEK5Q6P3R8 708 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 FAM47EQ6ZV65 393 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 ISCA2Q86U28 154 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 SLC22A9Q8IVM8 553 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 SPATA6LQ8N4H0 392 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZBTB2Q8N680 514 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 SIDT2Q8NBJ9 832 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 STAG3L4Q8TBR4 150 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 CD200R1Q8TD46 325 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 FAM131CQ96AQ9 280 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 NELL2Q99435 816 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 MECRQ9BV79 373 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZCCHC2Q9C0B9 1178 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 MKRN2Q9H000 416 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 RABEP2Q9H5N1 569 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 POLMQ9NP87 494 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 SORCS3Q9UPU3 1222 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 PRSS21Q9Y6M0 314 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 F5P12259 2224 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 CDH23Q9H251 3354 aa13.53□□□□□ -0.24
CALCOCO1-214ENST00000549613 SHISA7A6NL88 538 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 SYCE1LA8MT33 242 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 FADS2P1A8MWK0 482 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 TMEM114B3SHH9 223 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 PLRG1O43660 514 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 ATG13O75143 517 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 SNUPNO95149 360 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 TPBGLP0DKB5 382 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 CBSLP0DN79 551 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 CBSP35520 551 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 TAS2R38P59533 333 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 DNAJB13P59910 316 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 BST1Q10588 318 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 LIPMQ5VYY2 423 aa13.52□□□□□ -0.25
CALCOCO1-214ENST00000549613 OTOAQ7RTW8 1153 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms