RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 A0A1W2PQ45 241 aaPredicted RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 A0A1W2PQY0 241 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 TNK2Q07912 1038 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 SPIDRQ14159 915 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 PLEKHG4Q58EX7 1191 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 ADHFE1Q8IWW8 467 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 CREBZFQ9NS37 354 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 KCTD5Q9NXV2 234 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 H2AFY2Q9P0M6 372 aaPredicted RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 GRM6O15303 877 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 DNAJA2O60884 412 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 EPORP19235 508 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 OGNP20774 298 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 TRPC1P48995 793 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 CYP2A13Q16696 494 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 TIFABQ6ZNK6 161 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 CHST9Q7L1S5 443 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 SAPCD2Q86UD0 394 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 ZC3H7AQ8IWR0 971 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 PLD4Q96BZ4 506 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 KLHL32Q96NJ5 620 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 NR1H4Q96RI1 486 aaPredicted RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 HOPXQ9BPY8 73 aaPredicted RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 PAPPAQ13219 1627 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 H3BN98 237 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 ESR1P03372 595 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 GKP32189 559 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 RPL5P46777 297 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 AP1S1P61966 158 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 SFSWAPQ12872 951 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 GTF2H2Q13888 395 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 TRIM25Q14258 630 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 GTF2H2CQ6P1K8 395 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 RAVER1Q8IY67 606 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 TMCO5AQ8N6Q1 288 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 OR2T34Q8NGX1 318 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 OR2T3Q8NH03 318 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 ATL1Q8WXF7 558 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 TEKT2Q9UIF3 430 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 TBC1D30Q9Y2I9 924 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 HNRNPCL2B2RXH8 293 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 IFNA14P01570 189 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 CYP4B1P13584 511 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 PTGER3P43115 390 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 ECT2LQ008S8 904 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 TXNDC5Q8NBS9 432 aaKnown RBP16.13■□□□□ 0.17
CUX1-213ENST00000549414 FAM83DQ9H4H8 585 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 ADGRE2Q9UHX3 823 aa16.13■□□□□ 0.17
CUX1-213ENST00000549414 CCDC189A1A4V9 331 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 ANXA6P08133 673 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 CYP4F2P78329 520 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 RUNX1T1Q06455 604 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 C8orf59Q8N0T1 100 aaPredicted RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 CBR4Q8N4T8 237 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 KREMEN2Q8NCW0 462 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 ASZ1Q8WWH4 475 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 BBS4Q96RK4 519 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 KCNA7Q96RP8 456 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 MBLAC1A4D2B0 266 aaPredicted RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 ECI2O75521 394 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 APOA1P02647 267 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 UROSP10746 265 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 IMPDH1P20839 514 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 PAGE2BQ5JRK9 111 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 LYPLAL1Q5VWZ2 237 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 TMPRSS11BQ86T26 416 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 METTL3Q86U44 580 aaKnown RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 AARSD1Q9BTE6 412 aaKnown RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 AKTIPQ9H8T0 292 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 TMCO1Q9UM00 188 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 DUSP12Q9UNI6 340 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 KDM1AO60341 852 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 LSM3P62310 102 aaKnown RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 HMGCS1Q01581 520 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 MTSS1LQ765P7 747 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 CMTM8Q8IZV2 173 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 STX19Q8N4C7 294 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 ZNF557Q8N988 423 aaPredicted RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 SKA1Q96BD8 255 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 AP2M1Q96CW1 435 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
CUX1-213ENST00000549414 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
CUX1-213ENST00000549414 ZNF487B1APH4 448 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 H0Y858 1186 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 KPNA5O15131 536 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 ZNF623O75123 536 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 BCL10O95999 233 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 HERVK_113P63132 956 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 DEPDC1Q5TB30 811 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 CILP2Q8IUL8 1156 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 COL26A1Q96A83 441 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 TCF25Q9BQ70 676 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 ERVK-6Q9BXR3 956 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 RNF186Q9NXI6 227 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 BBIP1A8MTZ0 92 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 CKMT2P17540 419 aa16.11■□□□□ 0.17
CUX1-213ENST00000549414 MTPNP58546 118 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms