RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 A0A0D9SEW6 157 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 TARM1B6A8C7 271 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 IPO13O94829 963 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 APOA4P06727 396 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ALDOCP09972 364 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 RPL17P18621 184 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 NFKBIAP25963 317 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ALDH4A1P30038 563 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ATP5C1P36542 298 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 YBEYP58557 167 aaPredicted RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 TSTA3Q13630 321 aaPredicted RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 LRRC73Q5JTD7 316 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 PCID2Q5JVF3 399 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 CPSF7Q8N684 471 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 ISL2Q96A47 359 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ISOC1Q96CN7 298 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 SLC2A11Q9BYW1 496 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF385DQ9H6B1 395 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ARNT2Q9HBZ2 717 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ATP13A1Q9HD20 1204 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 PNPLA3Q9NST1 481 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 PLK2Q9NYY3 685 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 SPG21Q9NZD8 308 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 WARS2Q9UGM6 360 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 PTGES3LE9PB15 166 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 NME4O00746 187 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 H2AFYO75367 372 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 HSPA13P48723 471 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 GEMP55040 296 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 DEFB103AP81534 67 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PMS2P3Q13401 168 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PARP15Q460N3 678 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 HECTD2Q5U5R9 776 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PIWIL4Q7Z3Z4 852 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 FUNDC1Q8IVP5 155 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 HS3ST5Q8IZT8 346 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 OR7D4Q8NG98 312 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 SGCDQ92629 289 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ITFG2Q969R8 447 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF597Q96LX8 424 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 MRPL57Q9BQC6 102 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 AKTIPQ9H8T0 292 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CXorf21Q9HAI6 301 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 MRM3Q9HC36 420 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PCDH12Q9NPG4 1184 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 HACD3Q9P035 362 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ZNHIT2Q9UHR6 403 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CHD5Q8TDI0 1954 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 DHRS12A0PJE2 317 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TOR1BO14657 336 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CLOCKO15516 846 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 OR1I1O60431 355 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 RHOBTB1O94844 696 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF182P17025 639 aaPredicted RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 OR1E1P30953 314 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 SH3BGRP55822 239 aaPredicted RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TRAF2Q12933 501 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 MARC1Q5VT66 337 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TMEM207Q6UWW9 146 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 RANBP10Q6VN20 620 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CARM1Q86X55 608 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TCEAL8Q8IYN2 117 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 SLC22A15Q8IZD6 547 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PTERQ96BW5 349 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PLD4Q96BZ4 506 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 MYEOVQ96EZ4 313 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 SLC25A51Q9H1U9 297 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ZFP14Q9HCL3 533 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TLR9Q9NR96 1032 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 SCHIP1Q9P0W5 487 aaPredicted RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 GALPQ9UBC7 116 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PTPRSQ13332 1948 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ARID1BQ8NFD5 2236 aaPredicted RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 KANSL1LA0AUZ9 987 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CDC7O00311 574 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TACR2P21452 398 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 RENBPP51606 427 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 DGKQP52824 942 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CASP9P55211 416 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 GNA12Q03113 381 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 IL10RBQ08334 325 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TWF1Q12792 350 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TSNQ15631 228 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 KIAA1841Q6NSI8 718 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 C16orf87Q6PH81 154 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 KDELC1Q6UW63 502 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 IMP4Q96G21 291 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 PAWRQ96IZ0 340 aaKnown RBP10.99□□□□□ -0.65
LINC00661-204ENST00000549354 TEX37Q96LM6 180 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ADI1Q9BV57 179 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 DGCR6LQ9BY27 220 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 CCDC68Q9H2F9 335 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 ENTPD7Q9NQZ7 604 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 STOML2Q9UJZ1 356 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 VWA7Q9Y334 891 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 DGKBQ9Y6T7 804 aa10.99□□□□□ -0.65
LINC00661-204ENST00000549354 MYO10Q9HD67 2058 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 KIAA1671Q9BY89 1806 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SLCO1B7G3V0H7 640 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms