RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 PIKFYVEQ9Y2I7 2098 aa20.71■□□□□ 0.91
RITA1-201ENST00000548278 C1SP09871 688 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 ARSAP15289 507 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 VIPR2P41587 438 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 AGTR2P50052 363 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 POLR2LP62875 67 aaKnown RBP20.7■□□□□ 0.9
RITA1-201ENST00000548278 LCP2Q13094 533 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 CUL3Q13618 768 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 HERC3Q15034 1050 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 EML3Q32P44 896 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 TCEAL5Q5H9L2 206 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 LRRC73Q5JTD7 316 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 ANKS6Q68DC2 871 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 TRIM68Q6AZZ1 485 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 TXNDC11Q6PKC3 985 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 SNX32Q86XE0 403 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 KIAA1958Q8N8K9 716 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 ENDOVQ8N8Q3 282 aaKnown RBP20.7■□□□□ 0.9
RITA1-201ENST00000548278 RP9Q8TA86 221 aaKnown RBP20.7■□□□□ 0.9
RITA1-201ENST00000548278 HEPHQ9BQS7 1158 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 HTATIP2Q9BUP3 242 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 SLC7A8Q9UHI5 535 aa20.7■□□□□ 0.9
RITA1-201ENST00000548278 NCF1BA6NI72 391 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 NCF1CA8MVU1 366 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 ADH5P11766 374 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 NCF1P14598 390 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 ITGB6P18564 788 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 PPP1R3AQ16821 1122 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 FBXO48Q5FWF7 155 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 BRAT1Q6PJG6 821 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 CERS4Q9HA82 394 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 YBX2Q9Y2T7 364 aaKnown RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 DNAJC15Q9Y5T4 150 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 C2orf16Q68DN1 1984 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 AZIN1O14977 448 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 HOXC11O43248 304 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 SLC25A14O95258 325 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 VASPP50552 380 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 NAA20P61599 178 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 E2F5Q15329 346 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 KANK2Q63ZY3 851 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 NET1Q7Z628 596 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 ZNF483Q8TF39 744 aaPredicted RBP20.69■□□□□ 0.9
RITA1-201ENST00000548278 PBXIP1Q96AQ6 731 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 PLEKHG4BQ96PX9 1271 aa20.69■□□□□ 0.9
RITA1-201ENST00000548278 A0A1B0GTL3 188 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 NNMTP40261 264 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 SPINT3P49223 89 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 DGKGP49619 791 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 FOXA1P55317 472 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 CYLC2Q14093 348 aaPredicted RBP20.68■□□□□ 0.9
RITA1-201ENST00000548278 TGFBIQ15582 683 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 DUSP6Q16828 381 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 ATP13A5Q4VNC0 1218 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 GPRC6AQ5T6X5 926 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 LARP4Q71RC2 724 aaKnown RBP eCLIP20.68■□□□□ 0.9
RITA1-201ENST00000548278 C12orf40Q86WS4 652 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 C19orf60Q96EN9 201 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 CD274Q9NZQ7 290 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 PCTPQ9UKL6 214 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 LEFTY1O75610 366 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 TRIM16O95361 564 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 ADH1CP00326 375 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 LMNAP02545 664 aaKnown RBP20.68■□□□□ 0.9
RITA1-201ENST00000548278 EZRP15311 586 aaKnown RBP20.68■□□□□ 0.9
RITA1-201ENST00000548278 NRIP1P48552 1158 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 FAM78AQ5JUQ0 283 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 ZDHHC20Q5W0Z9 365 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 PGM2L1Q6PCE3 622 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 SBSNQ6UWP8 590 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 VN1R2Q8NFZ6 395 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 C3orf30Q96M34 536 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 DCLRE1BQ9H816 532 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 SEMA4BQ9NPR2 832 aaPredicted RBP20.68■□□□□ 0.9
RITA1-201ENST00000548278 ZDHHC3Q9NYG2 299 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 NUDT4Q9NZJ9 180 aa20.68■□□□□ 0.9
RITA1-201ENST00000548278 TSPAN11A1L157 253 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 UBDO15205 165 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 SNX2O60749 519 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 CTSLP07711 333 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 NSG1P42857 185 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 SHHQ15465 462 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 ARSIQ5FYB1 569 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 ADAMTSL2Q86TH1 951 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 NPAS3Q8IXF0 933 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 DEFB107AQ8IZN7 70 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 KCNA7Q96RP8 456 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 MTG2Q9H4K7 406 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 ASB1Q9Y576 335 aa20.67■□□□□ 0.9
RITA1-201ENST00000548278 CIB2O75838 187 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 SRPRAP08240 638 aaKnown RBP20.66■□□□□ 0.9
RITA1-201ENST00000548278 TRMT5Q32P41 509 aaKnown RBP20.66■□□□□ 0.9
RITA1-201ENST00000548278 ZBTB2Q8N680 514 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 WFIKKN2Q8TEU8 576 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 TWIST2Q8WVJ9 160 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 PANX3Q96QZ0 392 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 MRGBPQ9NV56 204 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 TSR3Q9UJK0 312 aaKnown RBP20.66■□□□□ 0.9
RITA1-201ENST00000548278 SLC27A6Q9Y2P4 619 aa20.66■□□□□ 0.9
RITA1-201ENST00000548278 CDH23Q9H251 3354 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms