RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PIP4K2CQ8TBX8 421 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 KLHL32Q96NJ5 620 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 IL17CQ9P0M4 197 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 MBD1Q9UIS9 605 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 CHD5Q8TDI0 1954 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 FAM149AA5PLN7 773 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 INPP4BO15327 924 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ADH1AP07327 375 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 XPAP23025 273 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ME2P23368 584 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 RECQLP46063 649 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 CCNHP51946 323 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 DDX39BQ13838 428 aaKnown RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 CPSF6Q16630 551 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■■■■□ 25
SCAF11-209ENST00000547018 C6orf10Q5SRN2 563 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 METTL21CQ5VZV1 264 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 REP15Q6BDI9 236 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 TLDC1Q6P9B6 456 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 DHDDSQ86SQ9 333 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SYVN1Q86TM6 617 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 FAM110BQ8TC76 370 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 CD200R1Q8TD46 325 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 POF1BQ8WVV4 589 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 GFM2Q969S9 779 aaKnown RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ZSWIM3Q96MP5 696 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ATOH8Q96SQ7 321 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 TUBB1Q9H4B7 451 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 WWOXQ9NZC7 414 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 GLYATL1P3A0A0U1RQE8 302 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF839A8K0R7 811 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 PGLSO95336 258 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 IGSF6O95976 241 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 CAPN1P07384 714 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
SCAF11-209ENST00000547018 BPIP17213 487 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ITGALP20701 1170 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 HMGCS1Q01581 520 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 KLC1Q07866 573 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 TMEM199Q8N511 208 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 C11orf49Q9H6J7 331 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SLAMF8Q9P0V8 285 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SYNCRIPO60506 623 aaKnown RBP12.58□□□□□ -0.4
SCAF11-209ENST00000547018 S100BP04271 92 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-209ENST00000547018 NCK1P16333 377 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 ATP6V1C1P21283 382 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 SERPINA4P29622 427 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 CDC16Q13042 620 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 NR6A1Q15406 480 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 TGFBIQ15582 683 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 PHKG1Q16816 387 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 SLC5A9Q2M3M2 681 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 TTC30BQ8N4P2 665 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 GPR26Q8NDV2 337 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 HMGCLL1Q8TB92 370 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 TEX37Q96LM6 180 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 TMEM74Q96NL1 305 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 ATP13A3Q9H7F0 1226 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 FBP2O00757 339 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 OGNP20774 298 aaKnown RBP12.58□□□□□ -0.4
SCAF11-209ENST00000547018 PAX7P23759 505 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 VIPR2P41587 438 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 MTTPP55157 894 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 CYHR1Q6ZMK1 362 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 CHST9Q7L1S5 443 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 RALGPS2Q86X27 583 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-209ENST00000547018 KLHDC8BQ8IXV7 354 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 SLC22A15Q8IZD6 547 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 ULK4Q96C45 1275 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 PLEKHG4BQ96PX9 1271 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 ATG10Q9H0Y0 220 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 FARSBQ9NSD9 589 aaKnown RBP12.58□□□□□ -0.4
SCAF11-209ENST00000547018 KLQ9UEF7 1012 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 POLG2Q9UHN1 485 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-209ENST00000547018 FRMPD3Q5JV73 1810 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
SCAF11-209ENST00000547018 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 KPNA3O00505 521 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-209ENST00000547018 NRP2O60462 931 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 TIMP1P01033 207 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 FGBP02675 491 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 HLA-EP13747 358 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 TYRP14679 529 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 ZNF7P17097 686 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-209ENST00000547018 HMOX2P30519 316 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 GRIA3P42263 894 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 UFM1P61960 85 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 LCP2Q13094 533 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 RABL3Q5HYI8 236 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 RNF217Q8TC41 542 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 PIH1D2Q8WWB5 315 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 KIAA1191Q96A73 305 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms