RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RASGEF1AQ8N9B8 481 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 FAM46DQ8NEK8 389 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
DDX54-203ENST00000546869 TTC1Q99614 292 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 TRIM51Q9BSJ1 452 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 NAT9Q9BTE0 207 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 SPTBN4Q9H254 2564 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 SPATS2LQ9NUQ6 558 aaKnown RBP14.28□□□□□ -0.12
DDX54-203ENST00000546869 TAAR2Q9P1P5 351 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 WHRNQ9P202 907 aa14.28□□□□□ -0.12
DDX54-203ENST00000546869 APOBEC2Q9Y235 224 aaKnown RBP14.28□□□□□ -0.12
DDX54-203ENST00000546869 PCYT1BQ9Y5K3 369 aaPredicted RBP14.28□□□□□ -0.12
DDX54-203ENST00000546869 ZNF106Q9H2Y7 1883 aaKnown RBP14.27□□□□□ -0.12
DDX54-203ENST00000546869 EME2A4GXA9 379 aaPredicted RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 GOLGA8MH3BSY2 632 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 CCL22O00626 93 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 RAD51CO43502 376 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 AP2A2O94973 939 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 GOT2P00505 430 aaKnown RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 GSTM1P09488 218 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 ATP1B2P14415 290 aaPredicted RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 ZNF7P17097 686 aaPredicted RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 NMBRP28336 390 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 TERF1P54274 439 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 PRAMEP78395 509 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 CRADDP78560 199 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 B4GALNT1Q00973 533 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 GSTM4Q03013 218 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 C2orf54Q08AI8 447 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 DMPKQ09013 629 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 BCL7AQ4VC05 210 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 DUPD1Q68J44 220 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 KIAA0930Q6ICG6 404 aaPredicted RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 TMEM220Q6QAJ8 160 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 WASH2PQ6VEQ5 465 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 PACS1Q6VY07 963 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 CHST15Q7LFX5 561 aaPredicted RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 TAS2R42Q7RTR8 314 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 SERPINA9Q86WD7 417 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 CCNJLQ8IV13 435 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 PIANPQ8IYJ0 282 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 PDIK1LQ8N165 341 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 MPP5Q8N3R9 675 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX54-203ENST00000546869 LRRC39Q96DD0 335 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 MFSD3Q96ES6 412 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 DCUN1D1Q96GG9 259 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 WASH6PQ9NQA3 447 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 SAMD15Q9P1V8 674 aa14.27□□□□□ -0.13
DDX54-203ENST00000546869 ARID1BQ8NFD5 2236 aaPredicted RBP14.27□□□□□ -0.13
DDX54-203ENST00000546869 C17orf113A0A1B0GUU1 675 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 SPAARA0A1B0GVQ0 90 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 OR5K4A6NMS3 321 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 QSOX1O00391 747 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 NOBOXO60393 691 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 FTH1P19P0C7X4 201 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 PNLIPP16233 465 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 VCLP18206 1134 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 PAMP19021 973 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 AK4P27144 223 aaPredicted RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 ACTR1BP42025 376 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 NSG1P42857 185 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 RPL21P46778 160 aaKnown RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 ARCN1P48444 511 aaKnown RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 ACADVLP49748 655 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 CDKN1CP49918 316 aaPredicted RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 CTSCP53634 463 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 ITGA8P53708 1063 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 ACTR1AP61163 376 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 DAB2P98082 770 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 E2F1Q01094 437 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 NR0B2Q15466 257 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 DBN1Q16643 649 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 ANKRD20A4Q4UJ75 823 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 FASTKD1Q53R41 847 aaKnown RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 AARS2Q5JTZ9 985 aaKnown RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 SLCO6A1Q86UG4 719 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 SLC35F3Q8IY50 421 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 GPR150Q8NGU9 434 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 OR6P1Q8NGX9 317 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 ADAMTS14Q8WXS8 1223 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 NAT6Q93015 286 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 RAB17Q9H0T7 212 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 DPEP2Q9H4A9 486 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 FAM96AQ9H5X1 160 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 SLC23A2Q9UGH3 650 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 ANAPC5Q9UJX4 755 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 PADI4Q9UM07 663 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 UTP11Q9Y3A2 253 aaKnown RBP14.26□□□□□ -0.13
DDX54-203ENST00000546869 PRKAB1Q9Y478 270 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 PLEKHM1Q9Y4G2 1056 aa14.26□□□□□ -0.13
DDX54-203ENST00000546869 DNAH14Q0VDD8 3507 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 ZCWPW2A0A1B0GU75 182 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 CCDC78A2IDD5 438 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 A6NCN8 305 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 OR51F1A6NGY5 319 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms