RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FNDC3BQ53EP0 1204 aaKnown RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 GDPD4Q6W3E5 623 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 CYHR1Q6ZMK1 362 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 MMAAQ8IVH4 418 aaKnown RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 FBXO39Q8N4B4 442 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 CDYL2Q8N8U2 506 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 MRGPRX3Q96LB0 322 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 GMPR2Q9P2T1 348 aaKnown RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 HS3ST2Q9Y278 367 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 WASF2Q9Y6W5 498 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 CCDC22O60826 627 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 VPS26AO75436 327 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 CDK14O94921 469 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 C1SP09871 688 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 HSPA7P48741 367 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 IL2P60568 153 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 MTA1Q13330 715 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 TSTA3Q13630 321 aaPredicted RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 GRB7Q14451 532 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 RBBP7Q16576 425 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 TSNAXIP1Q2TAA8 658 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 ELMSAN1Q6PJG2 1045 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 PARM1Q6UWI2 310 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 HPS6Q86YV9 775 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 PHOSPHO2Q8TCD6 241 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 ATOH8Q96SQ7 321 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 MYOCQ99972 504 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 C1orf50Q9BV19 199 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 RIOK2Q9BVS4 552 aaKnown RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 SLC24A3Q9HC58 644 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 HACD3Q9P035 362 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 ZNHIT2Q9UHR6 403 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 TRAF6Q9Y4K3 522 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 DNAJC15Q9Y5T4 150 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 CAPN8A6NHC0 703 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 UPK3BL1B0FP48 263 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 UPK3BL2E5RIL1 263 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 PRMT5O14744 637 aaPredicted RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 MGRN1O60291 552 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 POP4O95707 220 aaKnown RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 RBP1P09455 135 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 XPAP23025 273 aaPredicted RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 FSHRP23945 695 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 NUDT2P50583 147 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 CLCN7P51798 805 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 EPHA5P54756 1037 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 CACNG1Q06432 222 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 SNCBQ16143 134 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 LRRC36Q1X8D7 754 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 TMEM31Q5JXX7 168 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 MPP7Q5T2T1 576 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 DEFB107AQ8IZN7 70 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 RNF175Q8N4F7 328 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 PCDH20Q8N6Y1 951 aaKnown RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 GPR150Q8NGU9 434 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 FRS2Q8WU20 508 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 EGFL8Q99944 293 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 MTIF3Q9H2K0 278 aaKnown RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 ZNF225Q9UK10 706 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 LZTS1Q9Y250 596 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 RGSL1A5PLK6 1076 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 PIP5K1BO14986 540 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 KRT36O76013 467 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 COL6A2P12110 1019 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 CALB2P22676 271 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 PRKAA1Q13131 559 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 ARHGEF7Q14155 803 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 TGFBIQ15582 683 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 ZNF783Q6ZMS7 281 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 FRA10AC1Q70Z53 315 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 C2orf73Q8N5S3 287 aaPredicted RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 ASB16Q96NS5 453 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 TAGLN3Q9UI15 199 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 CDYLQ9Y232 598 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 ZNF510Q9Y2H8 683 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
CCDC38-202ENST00000546386 FREM2Q5SZK8 3169 aa11.82□□□□□ -0.52
CCDC38-202ENST00000546386 SPECC1L-ADORA2AF8WAN1 911 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 SDHDO14521 159 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 SMIM24O75264 130 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CRCPO75575 148 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 LATS1O95835 1130 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 IMPDH1P20839 514 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CD72P21854 359 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 NNMTP40261 264 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CASP2P42575 452 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 PREPP48147 710 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 HERVK_113P63132 956 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 KLF10Q13118 480 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 ACOX1Q15067 660 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 C2orf27AQ580R0 203 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 PAOXQ6QHF9 649 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 USP45Q70EL2 814 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 GPSM1Q86YR5 675 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CELF5Q8N6W0 485 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms