RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PWP1Q13610 501 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 FGL2Q14314 439 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 POU6F1Q14863 301 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 ACOX1Q15067 660 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 IRF4Q15306 451 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 NKPD1Q17RQ9 610 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 WDR45BQ5MNZ6 344 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 RNASEH2BQ5TBB1 312 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 IZUMO3Q5VZ72 239 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 DENND2CQ68D51 928 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 LAIR1Q6GTX8 287 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 DENND5AQ6IQ26 1287 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CRTC1Q6UUV9 634 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 LIPIQ6XZB0 460 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 HOOK3Q86VS8 718 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 PPIL6Q8IXY8 311 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 ZCCHC9Q8N567 271 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 DNAAF3Q8N9W5 541 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TMEM145Q8NBT3 493 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 NOA1Q8NC60 698 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 OR52K1Q8NGK4 314 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 KLK6Q92876 244 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 NUS1Q96E22 293 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 DTD2Q96FN9 168 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 SNF8Q96H20 258 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 RHOVQ96L33 236 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 COQ10AQ96MF6 247 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 SLC6A18Q96N87 628 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TMEM74Q96NL1 305 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 SRPK1Q96SB4 655 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 MYOCQ99972 504 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 ORAI3Q9BRQ5 295 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CARD6Q9BX69 1037 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 GPR63Q9BZJ6 419 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TRIM31Q9BZY9 425 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 RAB17Q9H0T7 212 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TRABDQ9H4I3 376 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 ARNT2Q9HBZ2 717 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 MAGEE1Q9HCI5 957 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 XAB2Q9HCS7 855 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 FZD3Q9NPG1 666 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CASS4Q9NQ75 786 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 PIH1D1Q9NWS0 290 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 DMTF1Q9Y222 760 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 COQ6Q9Y2Z9 468 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 SLCO1B1Q9Y6L6 691 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CNOT1A5YKK6 2376 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 ASCC3Q8N3C0 2202 aaKnown RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 A0A1W2PPC4 97 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 GOLGA8MH3BSY2 632 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 AP3B1O00203 1094 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 NDC80O14777 642 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 WNT9AO14904 365 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 AURKAO14965 403 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 RAD51BO15315 384 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SLC31A1O15431 190 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 CLDN7O95471 211 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PCCBP05166 539 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 GM2AP17900 193 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 IVDP26440 423 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 AKT2P31751 481 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 IGFALSP35858 605 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 MPLP40238 635 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 ETV3P41162 512 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 GRIA1P42261 906 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 DPP6P42658 865 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 RPL21P46778 160 aaKnown RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 ZNF140P52738 457 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SESN2P58004 480 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 DCDC1P59894 354 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SARNPP82979 210 aaKnown RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 CREB5Q02930 508 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SGCGQ13326 291 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 MTM1Q13496 603 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 MORF4L2Q15014 288 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PLCL1Q15111 1095 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 CDKN3Q16667 212 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PRAMEF13Q5VWM6 474 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 ALS2CLQ60I27 953 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SLC6A19Q695T7 634 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 LAYNQ6UX15 382 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 KYAT3Q6YP21 454 aaKnown RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 GCNT7Q6ZNI0 430 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 Q6ZVL8 140 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 HSD11B1LQ7Z5J1 315 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PTAR1Q7Z6K3 402 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SYT12Q8IV01 421 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 TTC30BQ8N4P2 665 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 MMGT1Q8N4V1 131 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 NAT8LQ8N9F0 302 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 TP53I13Q8NBR0 393 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 LRRN4CLQ8ND94 238 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 MCUQ8NE86 351 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 ASB12Q8WXK4 309 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 DNASE2BQ8WZ79 361 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 EID2BQ96D98 161 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 LOXL4Q96JB6 756 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SERAC1Q96JX3 654 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms