RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 INAVAQ3KP66 663 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 ADCK1Q86TW2 530 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 FBXO39Q8N4B4 442 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 RHEBL1Q8TAI7 183 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 ATOH8Q96SQ7 321 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 BRINP2Q9C0B6 783 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 SLC25A51Q9H1U9 297 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 TXNRD2Q9NNW7 524 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 NDFIP2Q9NV92 336 aa14.08□□□□□ -0.16
SRP54-202ENST00000546080 FAM234BA2RU67 622 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 ASB14A6NK59 587 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 PTGES3LE9PB15 166 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SLC1A7O00341 560 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SLC22A1O15245 554 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 NOBOXO60393 691 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SOAT2O75908 522 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 CNTN5O94779 1100 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 MYO1DO94832 1006 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 GABARAPO95166 117 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 NADKO95544 446 aaPredicted RBP14.07□□□□□ -0.16
SRP54-202ENST00000546080 SLC2A3P11169 496 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 PCMT1P22061 227 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 S100A1P23297 94 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SULT1C3Q6IMI6 304 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 EFL1Q7Z2Z2 1120 aaKnown RBP14.07□□□□□ -0.16
SRP54-202ENST00000546080 DSG4Q86SJ6 1040 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 GLMNQ92990 594 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 ISG20Q96AZ6 181 aaKnown RBP14.07□□□□□ -0.16
SRP54-202ENST00000546080 BCL7BQ9BQE9 202 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 AMBRA1Q9C0C7 1298 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 RMND5AQ9H871 391 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 ZIM2Q9NZV7 527 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 MYBPHLA2RUH7 354 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 MSI1O43347 362 aaKnown RBP14.07□□□□□ -0.16
SRP54-202ENST00000546080 MGEA5O60502 916 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 BMP4P12644 408 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 IL12AP29459 219 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 IST1P53990 364 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 MTPNP58546 118 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 KCNAB2Q13303 367 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 FBXO48Q5FWF7 155 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 PAGE2BQ5JRK9 111 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 ANKS6Q68DC2 871 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 ZNF549Q6P9A3 640 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SCIMPQ6UWF3 145 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SLC7A5P1Q8MH63 180 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 MFSD4AQ8N468 514 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 PPM1MQ96MI6 270 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 TMEM209Q96SK2 561 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 OSBPL10Q9BXB5 764 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 NUSAP1Q9BXS6 441 aaKnown RBP14.07□□□□□ -0.16
SRP54-202ENST00000546080 UGT2B28Q9BY64 529 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 TFB2MQ9H5Q4 396 aaKnown RBP14.07□□□□□ -0.16
SRP54-202ENST00000546080 SPC25Q9HBM1 224 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 ATP13A1Q9HD20 1204 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 NT5MQ9NPB1 228 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 PCDH12Q9NPG4 1184 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 RNF112Q9ULX5 631 aa14.07□□□□□ -0.16
SRP54-202ENST00000546080 SYCE1LA8MT33 242 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 HHLA1C9JL84 531 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 GNGT2O14610 69 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 AXIN1O15169 862 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 GPR32O75388 356 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 CST1P01037 141 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 GRIK1P39086 918 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 CD86P42081 329 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 TPTEP56180 551 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 ERVK-8P63133 956 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 SELPLGQ14242 412 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 MAPK11Q15759 364 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 XKR4Q5GH76 650 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 HABP4Q5JVS0 413 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 ZFAND4Q86XD8 727 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 FNDC5Q8NAU1 212 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 NDNFQ8TB73 568 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 ZNF599Q96NL3 588 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 RBM4BQ9BQ04 359 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 RBM4Q9BWF3 364 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 FBXO8Q9NRD0 319 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 DNAJB9Q9UBS3 223 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 ZNF229Q9UJW7 825 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 ERVK-11Q9UQG0 969 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 NAALAD2Q9Y3Q0 740 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 UTRNP46939 3433 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 MROH6A6NGR9 719 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 MAN1A2O60476 641 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 KERAO60938 352 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 KATNA1O75449 491 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 GLP2RO95838 553 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 CHRNA1P02708 482 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 UROSP10746 265 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 HOXB8P17481 243 aaPredicted RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 GGT1P19440 569 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 HOXC13P31276 330 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 CCR1P32246 355 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 HNRNPFP52597 415 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 MAXP61244 160 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms