RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CHCHD4Q8N4Q1 142 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 PJA1Q8NG27 643 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 OR4L1Q8NH43 312 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 SCAMP5Q8TAC9 235 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 TMBIM1Q969X1 311 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 SDCCAG3Q96C92 435 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 CDCA5Q96FF9 252 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 TEX37Q96LM6 180 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 TMEM74Q96NL1 305 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 GAD1Q99259 594 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 SEPHS2Q99611 448 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 NEURL2Q9BR09 285 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 LHPPQ9H008 270 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
TDP1-204ENST00000545686 SEMA4BQ9NPR2 832 aaPredicted RBP8.68□□□□□ -1.02
TDP1-204ENST00000545686 HEBP1Q9NRV9 189 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 FAM105AQ9NUU6 356 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 INTS7Q9NVH2 962 aaKnown RBP8.68□□□□□ -1.02
TDP1-204ENST00000545686 TAS2R13Q9NYV9 303 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 USE1Q9NZ43 259 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 CACNG4Q9UBN1 327 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 PCTPQ9UKL6 214 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 GIT1Q9Y2X7 761 aa8.68□□□□□ -1.02
TDP1-204ENST00000545686 J3KR12 359 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 CCL22O00626 93 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 TNFRSF10BO14763 440 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 SYNCRIPO60506 623 aaKnown RBP8.67□□□□□ -1.02
TDP1-204ENST00000545686 ECI2O75521 394 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 HOXC8P31273 242 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 CCR3P51677 355 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 OR4D2P58180 307 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 CHRNB3Q05901 458 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 IL10RBQ08334 325 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 SEMA3AQ14563 771 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 IHHQ14623 411 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 FUT11Q495W5 492 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 TIGD2Q4W5G0 525 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 TMEM214Q6NUQ4 689 aaKnown RBP8.67□□□□□ -1.02
TDP1-204ENST00000545686 CHST15Q7LFX5 561 aaPredicted RBP8.67□□□□□ -1.02
TDP1-204ENST00000545686 SCD5Q86SK9 330 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 ITIH5Q86UX2 942 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 GALNT13Q8IUC8 556 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 SPARTQ8N0X7 666 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 CLEC4FQ8N1N0 589 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 SVOPLQ8N434 492 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 NKAPQ8N5F7 415 aaKnown RBP8.67□□□□□ -1.02
TDP1-204ENST00000545686 OR8J3Q8NGG0 315 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 OR56A4Q8NGH8 313 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 ITFG1Q8TB96 612 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 BRSK1Q8TDC3 778 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 SLC39A13Q96H72 371 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 UGT2B28Q9BY64 529 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 TRIM8Q9BZR9 551 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 WDR12Q9GZL7 423 aaKnown RBP8.67□□□□□ -1.02
TDP1-204ENST00000545686 NAALAD2Q9Y3Q0 740 aa8.67□□□□□ -1.02
TDP1-204ENST00000545686 IGLV3-10A0A075B6K4 115 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ARL5CA6NH57 179 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 MOXD2PA6NHM9 499 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 CLDN25C9JDP6 229 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 M0QZQ0 153 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 TBC1D4O60343 1298 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 RHOBTB1O94844 696 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 MOCS2O96007 188 aaPredicted RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 ALDH2P05091 517 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 HAPLN1P10915 354 aaPredicted RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 GGT1P19440 569 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ITIH1P19827 911 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 CD9P21926 228 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 JAK1P23458 1154 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PLA2G16P53816 162 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 RPS3AP61247 264 aaKnown RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 TSPY1Q01534 308 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ATP1A4Q13733 1029 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ATP6AP1LQ52LC2 224 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 C6orf136Q5SQH8 315 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 OTUD3Q5T2D3 398 aaPredicted RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 GPRIN3Q6ZVF9 776 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 MOB2Q70IA6 237 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 R3HCC1LQ7Z5L2 792 aaKnown RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 GPR142Q7Z601 462 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 SYVN1Q86TM6 617 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 IGFN1Q86VF2 1251 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PARP8Q8N3A8 854 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 DTWD1Q8N5C7 304 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PNPLA1Q8N8W4 532 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PDZD8Q8NEN9 1154 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 OR52E4Q8NGH9 312 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PROKR1Q8TCW9 393 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 POP5Q969H6 163 aaKnown RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 MUL1Q969V5 352 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 FUBP1Q96AE4 644 aaKnown RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 BTN2A3PQ96KV6 586 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 KLHL5Q96PQ7 755 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ZNF382Q96SR6 550 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 KATNAL1Q9BW62 490 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 POLR1EQ9GZS1 481 aaKnown RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 GORASP2Q9H8Y8 452 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 HMG20AQ9NP66 347 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 INIPQ9NRY2 104 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms