RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ART4Q93070 314 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 SGF29Q96ES7 293 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 MRFAP1L1Q96HT8 127 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 VAT1Q99536 393 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 DDA1Q9BW61 102 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 TRABDQ9H4I3 376 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 RSPH14Q9UHP6 348 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 DNAJC16Q9Y2G8 782 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 B3GALT1Q9Y5Z6 326 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 MN1Q10571 1320 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-210ENST00000545493 OR5K4A6NMS3 321 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 EFCAB7A8K855 629 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 B4E171 279 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 KMOO15229 486 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 VEGFDO43915 354 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 ZNF7P17097 686 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-210ENST00000545493 HLA-DPA1P20036 260 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 RBL1P28749 1068 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 SPAM1P38567 509 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 TSPAN7P41732 249 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 MAPK9P45984 424 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 MPP3Q13368 585 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 SNAP47Q5SQN1 464 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 PID1Q7Z2X4 250 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 GLT6D1Q7Z4J2 308 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 ARHGAP22Q7Z5H3 698 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 CCDC112Q8NEF3 446 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 BLOC1S5Q8TDH9 187 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 JPH3Q8WXH2 748 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-210ENST00000545493 SH3KBP1Q96B97 665 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 PANX2Q96RD6 677 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 RBSNQ9H1K0 784 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 GBA3Q9H227 469 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 IL26Q9NPH9 171 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 LUC7LQ9NQ29 371 aaKnown RBP20.81■□□□□ 0.92
SCARB1-210ENST00000545493 IL17CQ9P0M4 197 aa20.81■□□□□ 0.92
SCARB1-210ENST00000545493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.81■□□□□ 0.92
SCARB1-210ENST00000545493 PIEZO2Q9H5I5 2752 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 COL6A6A6NMZ7 2263 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 GAPDHSO14556 408 aaPredicted RBP20.8■□□□□ 0.92
SCARB1-210ENST00000545493 PJA2O43164 708 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 CDK14O94921 469 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 EPOP01588 193 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 BRAFP15056 766 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 RAD9BQ6WBX8 426 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 ACRBPQ8NEB7 543 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 NCSTNQ92542 709 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 OGFRQ9NZT2 677 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 ZNF624Q9P2J8 865 aaPredicted RBP20.8■□□□□ 0.92
SCARB1-210ENST00000545493 PCDHB11Q9Y5F2 797 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 EPN1Q9Y6I3 576 aaPredicted RBP20.8■□□□□ 0.92
SCARB1-210ENST00000545493 DUSP10Q9Y6W6 482 aa20.8■□□□□ 0.92
SCARB1-210ENST00000545493 A8MU76 341 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 PDZK1P1A8MUH7 402 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 BUD23O43709 281 aaKnown RBP20.79■□□□□ 0.92
SCARB1-210ENST00000545493 PTPN7P35236 360 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 GFERP55789 205 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 OTUD4Q01804 1114 aaKnown RBP20.79■□□□□ 0.92
SCARB1-210ENST00000545493 XRCC4Q13426 336 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 ANKS6Q68DC2 871 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 FAM151BQ6UXP7 276 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 TMEM26Q6ZUK4 368 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 TRAPPC5Q8IUR0 188 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 AVL9Q8NBF6 648 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 ACTL9Q8TC94 416 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 DTX3LQ8TDB6 740 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-210ENST00000545493 UCK1Q9HA47 277 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 SLC39A1Q9NY26 324 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 HACD3Q9P035 362 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 KLHL3Q9UH77 587 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 TRHDEQ9UKU6 1024 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 PCDHA3Q9Y5H8 950 aa20.79■□□□□ 0.92
SCARB1-210ENST00000545493 MACROD2A1Z1Q3 448 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 H7C0C1 242 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 PLA2G2AP14555 144 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 XRCC1P18887 633 aaPredicted RBP20.78■□□□□ 0.92
SCARB1-210ENST00000545493 CTNNA2P26232 953 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 UGT1A3P35503 534 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 SLC19A1P41440 591 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 ATP5OP48047 213 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 CTSCP53634 463 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 RAB15P59190 212 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 COPS2P61201 443 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 OLIG2Q13516 323 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 CHRNA6Q15825 494 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 LINC00303Q3SY05 128 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 AADACL2Q6P093 401 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 DDHD1Q8NEL9 900 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 NKD1Q969G9 470 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 FAM118BQ9BPY3 351 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 FICDQ9BVA6 458 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 FSD1LQ9BXM9 530 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 LACRTQ9GZZ8 138 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 EPB41L1Q9H4G0 881 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 POT1Q9NUX5 634 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 SLC30A1Q9Y6M5 507 aa20.78■□□□□ 0.92
SCARB1-210ENST00000545493 GLYATL1P3A0A0U1RQE8 302 aa20.77■□□□□ 0.92
SCARB1-210ENST00000545493 GRID2IPA4D2P6 1211 aa20.77■□□□□ 0.92
SCARB1-210ENST00000545493 OR52A4PA6NMU1 304 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms