RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CARD9Q9H257 536 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 RMI1Q9H9A7 625 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 FAM207AQ9NSI2 230 aaPredicted RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 DTLQ9NZJ0 730 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 ATXN10Q9UBB4 475 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 EPHA6Q9UF33 1036 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 PCSK1NQ9UHG2 260 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 DCHS2Q6V1P9 2916 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 MED13LQ71F56 2210 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 OR52A4PA6NMU1 304 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 EPHB6O15197 1021 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 LRRTM2O43300 516 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ZG16O60844 167 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 CAPN1P07384 714 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ZNF30P17039 623 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 SOX5P35711 763 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 JAM2P57087 298 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ATP1A4Q13733 1029 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 DPYSQ14117 519 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ELOAQ14241 798 aaKnown RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 PLA2G4EQ3MJ16 856 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 PPP6R3Q5H9R7 873 aaPredicted RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 HENMT1Q5T8I9 393 aaKnown RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 IZUMO3Q5VZ72 239 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 CRTC3Q6UUV7 619 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ZBTB2Q8N680 514 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ZDHHC12Q96GR4 267 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 ZNF514Q96K75 400 aaPredicted RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 MLPHQ9BV36 600 aaPredicted RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 OR2AG1Q9H205 316 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 SLC40A1Q9NP59 571 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 WASH6PQ9NQA3 447 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 FGF21Q9NSA1 209 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 TCFL5Q9UL49 500 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 SNX7Q9UNH6 387 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 B3GNT3Q9Y2A9 372 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 COPG1Q9Y678 874 aaKnown RBP9.22□□□□□ -0.93
CHD4-212ENST00000545083 NAV3Q8IVL0 2385 aa9.22□□□□□ -0.93
CHD4-212ENST00000545083 PKDREJQ9NTG1 2253 aa9.21□□□□□ -0.93
CHD4-212ENST00000545083 PCNX1Q96RV3 2341 aa9.21□□□□□ -0.93
CHD4-212ENST00000545083 MDC1Q14676 2089 aaKnown RBP9.21□□□□□ -0.93
CHD4-212ENST00000545083 PDZK1P1A8MUH7 402 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 EIF3CLB5ME19 914 aaKnown RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 PRSS44E7EML9 344 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 PES1O00541 588 aaKnown RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 CPNE3O75131 537 aaKnown RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 GADD45BO75293 160 aaPredicted RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 SCRG1O75711 98 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 PRLP01236 227 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 SPTBP11277 2137 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 IL4RP24394 825 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 RPL10P27635 214 aaKnown RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 CA5AP35218 305 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 MMP13P45452 471 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 VAV2P52735 878 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 PDE1BQ01064 536 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 ACY1Q03154 408 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 RALGPS1Q5JS13 557 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 PLEKHS1Q5SXH7 462 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 ERMARDQ5T6L9 678 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 ABRAXAS1Q6UWZ7 409 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 TMEM102Q8N9M5 508 aaPredicted RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 ST6GALNAC3Q8NDV1 305 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 UBE2Q2Q8WVN8 375 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 UBXN4Q92575 508 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 EIF3CQ99613 913 aaKnown RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 MAP3K3Q99759 626 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 RAB33BQ9H082 229 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 FAM83DQ9H4H8 585 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 NT5MQ9NPB1 228 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 NLRC4Q9NPP4 1024 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 POT1Q9NUX5 634 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 C5AR2Q9P296 337 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 G3BP2Q9UN86 482 aaKnown RBP9.21□□□□□ -0.94
CHD4-212ENST00000545083 CHKBQ9Y259 395 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 DNAJC16Q9Y2G8 782 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 PCDHGA10Q9Y5H3 936 aa9.21□□□□□ -0.94
CHD4-212ENST00000545083 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 MASP2O00187 686 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 E2F3O00716 465 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 CHUKO15111 745 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 DDX3YO15523 660 aaKnown RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 JCHAINP01591 159 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 RAB40ALP0C0E4 278 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ZNF7P17097 686 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 AMPD1P23109 780 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 PSMA2P25787 234 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 HCAR3P49019 387 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 SPINT3P49223 89 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 DRG2P55039 364 aaKnown RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 POLR2FP61218 127 aaKnown RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 GPR19Q15760 415 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 KYNUQ16719 465 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 TPD52L1Q16890 204 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 INSCQ1MX18 579 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ZXDCQ2QGD7 858 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 ANO6Q4KMQ2 910 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 TDRD12Q587J7 1177 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms