RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ENAMQ9NRM1 1142 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 TRNAU1APQ9NX07 287 aaKnown RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 HACD3Q9P035 362 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 GULP1Q9UBP9 304 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 PADI4Q9UM07 663 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 GPR34Q9UPC5 381 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 SHOC2Q9UQ13 582 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 CLCA2Q9UQC9 943 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 SLC17A4Q9Y2C5 497 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 AAR2Q9Y312 384 aaKnown RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF711Q9Y462 761 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ARHGEF17Q96PE2 2063 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 KNTC1P50748 2209 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 C1QTNF9BB2RNN3 333 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 F5H423 210 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 M0R082 166 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 INPP4BO15327 924 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 OIP5O43482 229 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 OPA1O60313 960 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 B3GALT4O96024 378 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 MT-CO3P00414 261 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SOD1P00441 154 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SLC4A1P02730 911 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 FGF1P05230 155 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 IVLP07476 585 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 CELA3AP09093 270 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 PIRTP0C851 137 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 C1QTNF9P0C862 333 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 MYF5P13349 255 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 STIP1P31948 543 aaKnown RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 HMGCLP35914 325 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 GNPDA1P46926 289 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 DCDC1P59894 354 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 CCZ1BP86790 482 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 CCZ1P86791 482 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 INSM1Q01101 510 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 TCEA2Q15560 299 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SLC1A5Q15758 541 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 ST3GAL2Q16842 350 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SIRPB2Q5JXA9 342 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 HENMT1Q5T8I9 393 aaKnown RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 ZDHHC20Q5W0Z9 365 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 PDPK2PQ6A1A2 396 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 DOK6Q6PKX4 331 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 KDELC1Q6UW63 502 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 CHSY3Q70JA7 882 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 EFL1Q7Z2Z2 1120 aaKnown RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 VN1R5Q7Z5H4 357 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SLC35F3Q8IY50 421 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SLC25A41Q8N5S1 370 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 TRAM1L1Q8N609 369 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 IPMKQ8NFU5 416 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 TRIM58Q8NG06 486 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 WDR48Q8TAF3 677 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 MAPK15Q8TD08 544 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 GPBAR1Q8TDU6 330 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SREK1Q8WXA9 508 aaKnown RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SCARF2Q96GP6 870 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 OXNAD1Q96HP4 312 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 COX14Q96I36 57 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SPATA13Q96N96 652 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 AGAP2Q99490 1192 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 FAM118BQ9BPY3 351 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 FRMD8P1Q9BZ68 369 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 DPEP2Q9H4A9 486 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SUDS3Q9H7L9 328 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 C10orf88Q9H8K7 445 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 RMI1Q9H9A7 625 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SRA1Q9HD15 236 aaKnown RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SIRPGQ9P1W8 387 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 VPS18Q9P253 973 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 NFKBIL1Q9UBC1 381 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 SUFUQ9UMX1 484 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 TMEM98Q9Y2Y6 226 aa7.31□□□□□ -1.24
CPSF7-224ENST00000544990 ZFC3H1O60293 1989 aaKnown RBP7.31□□□□□ -1.24
CPSF7-224ENST00000544990 LY6G6EA0A0G2JKS1 128 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 FAM149AA5PLN7 773 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 TRABD2BA6NFA1 517 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 C5orf60A6NFR6 353 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 C2orf81A6NN90 581 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PSMD3O43242 534 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ZW10O43264 779 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PPFIA2O75334 1257 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 TCEA3O75764 348 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 WFS1O76024 890 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 SLC25A14O95258 325 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 AGTP01019 485 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ALBP02768 609 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GLB1P16278 677 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 NME2P22392 152 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PSMB4P28070 264 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ACTN2P35609 894 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ADCY8P40145 1251 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 POLD2P49005 469 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 RPS26P62854 115 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms