RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CEP97Q8IW35 865 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 RORBQ92753 470 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 SORT1Q99523 831 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 WDR12Q9GZL7 423 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 COQ10BQ9H8M1 238 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 FKBPLQ9UIM3 349 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 MOSPD1Q9UJG1 213 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 MKL2Q9ULH7 1088 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 GLYATL1P3A0A0U1RQE8 302 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 A0A1B0GVM2 712 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TCAF2A6NFQ2 919 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TP73O15350 636 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 DNAJA2O60884 412 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ULK1O75385 1050 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 BCAS2O75934 225 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 EPN2O95208 641 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 CYP11A1P05108 521 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 GPIP06744 558 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 SLC7A1P30825 629 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 PRKCZQ05513 592 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 CRHR2Q13324 411 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 MAPKAPK3Q16644 382 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TIGD2Q4W5G0 525 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 BROXQ5VW32 411 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 IL23RQ5VWK5 629 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 PPP4R4Q6NUP7 873 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 IKBIPQ70UQ0 350 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TXNDC5Q8NBS9 432 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 SELENOMQ8WWX9 145 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ITCHQ96J02 903 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 COX4I2Q96KJ9 171 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 AKTIPQ9H8T0 292 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 CARD8Q9Y2G2 431 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 GNG14A0A1W2PPG7 69 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 KPNA5O15131 536 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TBX18O95935 607 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 COX7A2P14406 83 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 NELFEP18615 380 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 CCND3P30281 292 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 MAGEA11P43364 429 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 PRIM2P49643 509 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TSNQ15631 228 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 TECRLQ5HYJ1 363 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ATAD3BQ5T9A4 648 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ZDHHC20Q5W0Z9 365 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 AGMOQ6ZNB7 445 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ADGRG6Q86SQ4 1221 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 AHI1Q8N157 1196 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TBC1D19Q8N5T2 526 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 OR10T2Q8NGX3 314 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 POP5Q969H6 163 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 TM6SF2Q9BZW4 377 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 REXO4Q9GZR2 422 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 RIBC2Q9H4K1 309 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ZFYVE1Q9HBF4 777 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 NLE1Q9NVX2 485 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 KIAA1522Q9P206 1035 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 CENPXA8MT69 81 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 G3V2T6 193 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 STX16-NPEPL1H3BU86 382 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ECI2O75521 394 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 C1RP00736 705 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CST1P01037 141 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CHRNA1P02708 482 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 LINGO3P0C6S8 592 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 OR1D2P34982 312 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ACVRL1P37023 503 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 MLLT6P55198 1093 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 POLR2LP62875 67 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 FOXM1Q08050 763 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 BTG3Q14201 252 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 RAB41Q5JT25 222 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TCAIMQ8N3R3 496 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FAM47BQ8NA70 645 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ELMO1Q92556 727 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TMEM159Q96B96 161 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TADA1Q96BN2 335 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 IMP4Q96G21 291 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 CENPNQ96H22 339 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 DERL2Q9GZP9 239 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 MOV10Q9HCE1 1003 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 ZFP14Q9HCL3 533 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ADPRHL2Q9NX46 363 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 IMPAD1Q9NX62 359 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SPASTQ9UBP0 616 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ADAMTS6Q9UKP5 1117 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ZNF490Q9ULM2 529 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 PCDHB9Q9Y5E1 797 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 H3BNX3 289 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 HMGB3O15347 200 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 KDELR3O43731 214 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PRAMEF11O60813 436 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 RECQL5O94762 991 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 SLC25A14O95258 325 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 IFNA14P01570 189 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CNPP09543 421 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 ZNF12P17014 697 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SPAM1P38567 509 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PTGER3P43115 390 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SMAD3P84022 425 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms