RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 ADGRA1Q86SQ6 560 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 HDDC3Q8N4P3 179 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 NAXEQ8NCW5 288 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 GNSP15586 552 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 GRK5P34947 590 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 SLC6A9P48067 706 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 PLEKHG4Q58EX7 1191 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 SPDYCQ5MJ68 293 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 GK5Q6ZS86 529 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 SPATA19Q7Z5L4 167 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 RIOX2Q8IUF8 465 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 GPALPP1Q8IXQ4 340 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 FBXO22Q8NEZ5 403 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 MCFD2Q8NI22 146 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 FCRL2Q96LA5 508 aaPredicted RBP19.89■□□□□ 0.77
BPTF-208ENST00000544778 TCF12Q99081 682 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 OR51V1Q9H2C8 321 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 UPB1Q9UBR1 384 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 NAE1Q13564 534 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 LINGO4Q6UY18 593 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 HFE2Q6ZVN8 426 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 OSBPL11Q9BXB4 747 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 ACSS2Q9NR19 701 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 ZNF639Q9UID6 485 aa19.89■□□□□ 0.77
BPTF-208ENST00000544778 MTTPP55157 894 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 RFTN2Q52LD8 501 aaPredicted RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 CCDC80Q76M96 950 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 LINGO2Q7L985 606 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 RANBP3LQ86VV4 465 aaPredicted RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 SPERTQ8NA61 448 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 TIFAQ96CG3 184 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 MED28Q9H204 178 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 NFATC1O95644 943 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 SLC35G6P0C7Q6 338 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 IGFBP5P24593 272 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 YAP1P46937 504 aaKnown RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 SLC9B1Q4ZJI4 515 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 OR10H4Q8NGA5 316 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 HERVK_113Q902F9 699 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 DIRAS2Q96HU8 199 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 SNX7Q9UNH6 387 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 TRAF6Q9Y4K3 522 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 TNFRSF11BO00300 401 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 TSPAN1O60635 241 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 CDK14O94921 469 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 NADKO95544 446 aaPredicted RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 SCGB1D2O95969 90 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 GLRA2P23416 452 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 POLR2JP52435 117 aaKnown RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 ADAM8P78325 824 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 NOL11Q9H8H0 719 aaKnown RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 GDF3Q9NR23 364 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 CNTNAP1P78357 1384 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 L7N2F9 121 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 RGS10O43665 173 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 VAMP2P63027 116 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 OLR1P78380 273 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 MRPS5P82675 430 aaKnown RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 ZNF627Q7L945 461 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 RDH11Q8TC12 318 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 CDH19Q9H159 772 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 TIMM8BQ9Y5J9 83 aaPredicted RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 PMF1-BGLAPU3KQ54 211 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 FADS2P1A8MWK0 482 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 FABP3P05413 133 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 ITGAVP06756 1048 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 AP2S1P53680 142 aaPredicted RBP19.88■□□□□ 0.77
BPTF-208ENST00000544778 MXD1Q05195 221 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 OLFML1Q6UWY5 402 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 SPPL2CQ8IUH8 684 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 HSFY1Q96LI6 401 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 ARHGAP9Q9BRR9 750 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 PNPLA3Q9NST1 481 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 MYO3AQ8NEV4 1616 aa19.88■□□□□ 0.77
BPTF-208ENST00000544778 LYPLA1O75608 230 aaPredicted RBP19.87■□□□□ 0.77
BPTF-208ENST00000544778 ELP6Q0PNE2 266 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 DHDDSQ86SQ9 333 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 PIGXQ8TBF5 258 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 VWA7Q9Y334 891 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 C5orf51A6NDU8 294 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 BRCC3P46736 316 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 GRSF1Q12849 480 aaKnown RBP eCLIP19.87■□□□□ 0.77
BPTF-208ENST00000544778 SYVN1Q86TM6 617 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 TOP1MTQ969P6 601 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 VARSP26640 1264 aaKnown RBP19.87■□□□□ 0.77
BPTF-208ENST00000544778 HECTD2Q5U5R9 776 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 OR4K2Q8NGD2 314 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 ARNTL2Q8WYA1 636 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 GTPBP3Q969Y2 492 aaKnown RBP19.87■□□□□ 0.77
BPTF-208ENST00000544778 PPM1MQ96MI6 270 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 SRMSQ9H3Y6 488 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 PLA2R1Q13018 1463 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 ZSCAN5BA6NJL1 495 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 ZNF20P17024 532 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 TMEM119Q4V9L6 283 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 TMEM192Q8IY95 271 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 ZNF224Q9NZL3 707 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 YDJCA8MPS7 323 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 GXYLT1Q4G148 440 aa19.87■□□□□ 0.77
BPTF-208ENST00000544778 LIX1Q8N485 282 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms