RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	OR2W6P	Q8NHA6	318 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	FAM45A	Q8TCE6	357 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	SLC44A1	Q8WWI5	657 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	DNASE2B	Q8WZ79	361 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	FUBP1	Q96AE4	644 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ELMO2	Q96JJ3	720 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ZNF514	Q96K75	400 aa	Predicted RBP	11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ZC3H10	Q96K80	434 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	WDR92	Q96MX6	357 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ZIM3	Q96PE6	472 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	BOC	Q9BWV1	1114 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	IRF2BPL	Q9H1B7	796 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	OR2AG1	Q9H205	316 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	RHOJ	Q9H4E5	214 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	TM9SF3	Q9HD45	589 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	KL	Q9UEF7	1012 aa		11.76	□□□□□ -0.53
DDB1-223	ENST00000543658	ATXN2	Q99700	1313 aa	Known RBP	11.76	□□□□□ -0.53
DDB1-223	ENST00000543658		A0A1B0GTW7	788 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	FAM95C	A0A1B0GW59	222 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	C10orf142	B7Z368	130 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	LILRB5	O75023	590 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	HAUS5	O94927	633 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	AP2A2	O94973	939 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	S1PR4	O95977	384 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	AHSG	P02765	367 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ESR1	P03372	595 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	HOXC4	P09017	264 aa	Predicted RBP	11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	MYZAP	P0CAP1	466 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	PKM	P14618	531 aa	Known RBP	11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	SAT1	P21673	171 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ITPKA	P23677	461 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ATP5D	P30049	168 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	FMO4	P31512	558 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	SLCO1A2	P46721	670 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	AFF3	P51826	1226 aa	Known RBP	11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	LIMK2	P53671	638 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	PFN3	P60673	137 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	CEP85L	Q5SZL2	805 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	UGT3A1	Q6NUS8	523 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	CNST	Q6PJW8	725 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	MACC1	Q6ZN28	852 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ADGRG6	Q86SQ4	1221 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	LRRTM4	Q86VH4	590 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ZC3HC1	Q86WB0	502 aa	Known RBP	11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	OR13H1	Q8NG92	308 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	OR56A4	Q8NGH8	313 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	EPS8L3	Q8TE67	593 aa	Known RBP	11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ANKRD7	Q92527	254 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	LPGAT1	Q92604	370 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	PIGK	Q92643	395 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	COX14	Q96I36	57 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	VPS39	Q96JC1	886 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	BMF	Q96LC9	184 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	CENPH	Q9H3R5	247 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	RMI1	Q9H9A7	625 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	TBK1	Q9UHD2	729 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ZNF180	Q9UJW8	692 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	TMEM98	Q9Y2Y6	226 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	PSAT1	Q9Y617	370 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	ADAMTS9	Q9P2N4	1935 aa		11.75	□□□□□ -0.53
DDB1-223	ENST00000543658	IGLV3-16	A0A075B6K0	115 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	PRSS38	A1L453	326 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	OR2AG2	A6NM03	316 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	OR1I1	O60431	355 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	VPS26A	O75436	327 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	FAM155B	O75949	473 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	TRIM16	O95361	564 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ITGA2B	P08514	1039 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	F7	P08709	466 aa	Predicted RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	VCL	P18206	1134 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	KRT15	P19012	456 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	CHRM3	P20309	590 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	PBLD	P30039	288 aa	Predicted RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ABCG1	P45844	678 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ADAR	P55265	1226 aa	Known RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	PDAP1	Q13442	181 aa	Known RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	SYTL3	Q4VX76	610 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ZNF648	Q5T619	568 aa	Predicted RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	TMEM220	Q6QAJ8	160 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ADGRD1	Q6QNK2	874 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	CRTC3	Q6UUV7	619 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	KDM7A	Q6ZMT4	941 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	GALNT13	Q8IUC8	556 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	SYT12	Q8IV01	421 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	CEP76	Q8TAP6	659 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	DCAKD	Q8WVC6	231 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	MTBP	Q96DY7	904 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	TSPAN17	Q96FV3	270 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	LGR4	Q9BXB1	951 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	STMN4	Q9H169	189 aa	Predicted RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	VIPAS39	Q9H9C1	493 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	TAS2R13	Q9NYV9	303 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ATXN10	Q9UBB4	475 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	ZNHIT2	Q9UHR6	403 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	TMPRSS11E	Q9UL52	423 aa		11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	CNOT6	Q9ULM6	557 aa	Known RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658	OAS3	Q9Y6K5	1087 aa	Known RBP	11.74	□□□□□ -0.53
DDB1-223	ENST00000543658		R4GN57	208 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms