RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TEFQ10587 303 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ITGADQ13349 1161 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PTPRCAPQ14761 206 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TAZQ16635 292 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SMN1Q16637 294 aaKnown RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PNLIPRP3Q17RR3 467 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PRAMEF19Q5SWL8 479 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ABHD17BQ5VST6 288 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SHEQ5VZ18 495 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 LRIG3Q6UXM1 1119 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TRIM72Q6ZMU5 477 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 Q6ZNX1 250 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PQLC2Q6ZP29 291 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 C11orf57Q6ZUT1 292 aaPredicted RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 DPPA4Q7L190 304 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ABI3BPQ7Z7G0 1075 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 RASAL3Q86YV0 1011 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TIGD4Q8IY51 512 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 MAML2Q8IZL2 1156 aaPredicted RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PARP16Q8N5Y8 322 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ARL14EPQ8N8R7 260 aaPredicted RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 RTL3Q8N8U3 475 aaKnown RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 KDM1BQ8NB78 822 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC4A11Q8NBS3 891 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PSMA8Q8TAA3 256 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 BCAS4Q8TDM0 211 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SPACA9Q96E40 222 aaPredicted RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 NLRP4Q96MN2 994 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PARK7Q99497 189 aaKnown RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM118BQ9BPY3 351 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PCGF1Q9BSM1 259 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 INPP5KQ9BT40 448 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PIGMQ9H3S5 423 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 EPB41L5Q9HCM4 733 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 DDX4Q9NQI0 724 aaKnown RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ANO10Q9NW15 660 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TAS2R14Q9NYV8 317 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ERAP1Q9NZ08 941 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 HEY2Q9UBP5 337 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC24A2Q9UI40 661 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SH3BGRL2Q9UJC5 107 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ST3GAL5Q9UNP4 418 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PCDHGA5Q9Y5G8 931 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PCDHGA1Q9Y5H4 931 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 HS3ST3A1Q9Y663 406 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PREX2Q70Z35 1606 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MAP3K1Q13233 1512 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 RNF103-CHMP3A0A140T963 221 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 KANSL1LA0AUZ9 987 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SMIM30A4D0T7 59 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 CPED1A4D0V7 1026 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TMEM202A6NGA9 273 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 H7C1Q1 480 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 RNF103O00237 685 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 VCYO14598 125 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MAP2K7O14733 419 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC30A4O14863 429 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SMAD9O15198 467 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MOSPD3O75425 235 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 GH2P01242 217 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 LCKP06239 509 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 VIMP08670 466 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 BMP5P22003 454 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 IL10P22301 178 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TACR3P29371 465 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SNU13P55769 128 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ADORA2A-AS1P86434 159 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SREBF2Q12772 1141 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ARHGEF6Q15052 776 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TAF7Q15545 349 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SOWAHAQ2M3V2 549 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 VWC2Q2TAL6 325 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MYLK3Q32MK0 819 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TWISTNBQ3B726 338 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ATP13A5Q4VNC0 1218 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM98BQ52LJ0 330 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 PLEKHO1Q53GL0 409 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 DNTTIP2Q5QJE6 756 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 AAGABQ6PD74 315 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 C15orf39Q6ZRI6 1047 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 INTS8Q75QN2 995 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 KCTD9Q7L273 389 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MCM10Q7L590 875 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SERPINA11Q86U17 422 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 DENND6AQ8IWF6 608 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 CNTN4Q8IWV2 1026 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ZNF595Q8IYB9 648 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SFRP1Q8N474 314 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 HDDC3Q8N4P3 179 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MCPH1Q8NEM0 835 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 DENND1AQ8TEH3 1009 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ROBO4Q8WZ75 1007 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 SNAPC3Q92966 411 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 EXT2Q93063 718 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MSI2Q96DH6 328 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 VCPIP1Q96JH7 1222 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 C16orf45Q96MC5 204 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ACOX2Q99424 681 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms