RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 TGIF1Q15583 401 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 CHRNA6Q15825 494 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 INSCQ1MX18 579 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ANKRD20A2Q5SQ80 823 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ANKRD20A1Q5TYW2 823 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ANKRD20A3Q5VUR7 823 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ZDHHC20Q5W0Z9 365 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 PEX26Q7Z412 305 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 SLC9B2Q86UD5 537 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ZNF547Q8IVP9 402 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 OR10G6Q8NH81 332 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 SH3KBP1Q96B97 665 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 DPYSL5Q9BPU6 564 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 FICDQ9BVA6 458 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ZMYND15Q9H091 742 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 UGT1A7Q9HAW7 530 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 UGT1A10Q9HAW8 530 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 UGT1A8Q9HAW9 530 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCND1-205ENST00000542367 CPNE7Q9UBL6 633 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 ACSL6Q9UKU0 697 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 PACSIN2Q9UNF0 486 aaPredicted RBP16.19■□□□□ 0.18
CCND1-205ENST00000542367 DNAJC16Q9Y2G8 782 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 PKP3Q9Y446 797 aa16.19■□□□□ 0.18
CCND1-205ENST00000542367 EIF4E1BA6NMX2 242 aaKnown RBP16.18■□□□□ 0.18
CCND1-205ENST00000542367 C9orf172C9J069 976 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 THRAP10827 490 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 FGF3P11487 239 aaPredicted RBP16.18■□□□□ 0.18
CCND1-205ENST00000542367 PSMB4P28070 264 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 VAC14Q08AM6 782 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 PRPSAP1Q14558 356 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 PTPRCAPQ14761 206 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 FAM151BQ6UXP7 276 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 RANBP10Q6VN20 620 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 SYCE1Q8N0S2 351 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 TXLNBQ8N3L3 684 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 DTX3LQ8TDB6 740 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 BRSK1Q8TDC3 778 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 APOL2Q9BQE5 337 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 TIMM29Q9BSF4 260 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.18■□□□□ 0.18
CCND1-205ENST00000542367 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
CCND1-205ENST00000542367 SCHIP1Q9P0W5 487 aaPredicted RBP16.18■□□□□ 0.18
CCND1-205ENST00000542367 AAR2Q9Y312 384 aaKnown RBP16.18■□□□□ 0.18
CCND1-205ENST00000542367 SMG1Q96Q15 3661 aaKnown RBP16.18■□□□□ 0.18
CCND1-205ENST00000542367 GLYATL1P3A0A0U1RQE8 302 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 STX7O15400 261 aaKnown RBP16.17■□□□□ 0.18
CCND1-205ENST00000542367 DUX1O43812 170 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 STK10O94804 968 aaKnown RBP16.17■□□□□ 0.18
CCND1-205ENST00000542367 FTCDO95954 541 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 PTMAP06454 111 aaKnown RBP16.17■□□□□ 0.18
CCND1-205ENST00000542367 CSTF2P33240 577 aaKnown RBP eCLIP16.17■□□□□ 0.18
CCND1-205ENST00000542367 CA5AP35218 305 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 ADRA1AP35348 466 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 OLIG2Q13516 323 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 GTF2H3Q13889 308 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 SEPT7Q16181 437 aaKnown RBP16.17■□□□□ 0.18
CCND1-205ENST00000542367 SNAP47Q5SQN1 464 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 TMEM164Q5U3C3 297 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 CCDC81Q6ZN84 652 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 TRAPPC5Q8IUR0 188 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 UBL4BQ8N7F7 174 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 AGBL5Q8NDL9 886 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 CCDC110Q8TBZ0 833 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 NCSTNQ92542 709 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 SPATA13Q96N96 652 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 TTC25Q96NG3 672 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 CCNL2Q96S94 520 aaPredicted RBP16.17■□□□□ 0.18
CCND1-205ENST00000542367 TBC1D10AQ9BXI6 508 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 ARL5AQ9Y689 179 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 IGSF10Q6WRI0 2623 aa16.17■□□□□ 0.18
CCND1-205ENST00000542367 MGAQ8IWI9 3026 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 A8MU76 341 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 PDZK1P1A8MUH7 402 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 MIF4GDA9UHW6 222 aaKnown RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 K7ENP7 123 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 ATXN7O15265 892 aaPredicted RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 DDX3YO15523 660 aaKnown RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 GPR39O43194 453 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 PPFIA2O75334 1257 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 VIPP01282 170 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 LIPCP11150 499 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 XRCC1P18887 633 aaPredicted RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 RPL10P27635 214 aaKnown RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 MAPK9P45984 424 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 EPHA4P54764 986 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 UBE2IP63279 158 aaKnown RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 ITGA9Q13797 1035 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 COL9A2Q14055 689 aaPredicted RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 LDLRAP1Q5SW96 308 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 INO80CQ6PI98 192 aaPredicted RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 WDR74Q6RFH5 385 aaPredicted RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 C11orf96Q7Z7L8 435 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 ZFAND4Q86XD8 727 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 AVL9Q8NBF6 648 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 SNRNP27Q8WVK2 155 aaKnown RBP16.16■□□□□ 0.18
CCND1-205ENST00000542367 SLC39A7Q92504 469 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 TAAR9Q96RI9 348 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 B3GNT4Q9C0J1 378 aa16.16■□□□□ 0.18
CCND1-205ENST00000542367 ZNF624Q9P2J8 865 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms