RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CRADDP78560 199 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 CFHR1Q03591 330 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 CYP4F3Q08477 520 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 CDH17Q12864 832 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 NKAIN2Q5VXU1 208 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ANKRD22Q5VYY1 191 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 PAPD7Q5XG87 772 aaKnown RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 TMEM220Q6QAJ8 160 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ZNF574Q6ZN55 896 aaPredicted RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 FAM83HQ6ZRV2 1179 aaPredicted RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 ZNF534Q76KX8 674 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 DET1Q7L5Y6 550 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ZNF438Q7Z4V0 828 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 SPRED1Q7Z699 444 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 B3GNT8Q7Z7M8 397 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 LINC00523Q86TU6 105 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 LRRTM4Q86VH4 590 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ZNF761Q86XN6 746 aaPredicted RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 CREG2Q8IUH2 290 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 SFRP1Q8N474 314 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 DNAAF3Q8N9W5 541 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 KDF1Q8NAX2 398 aaPredicted RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 OR13J1Q8NGT2 312 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 GDAP1Q8TB36 358 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 SLC37A2Q8TED4 501 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 NAT6Q93015 286 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 C19orf43Q9BQ61 176 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 LRRN3Q9H3W5 708 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 CHRAC1Q9NRG0 131 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 SMOXQ9NWM0 555 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
YBX3-212ENST00000542002 DNAJC16Q9Y2G8 782 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 WDR37Q9Y2I8 494 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 PTPRBP23467 1997 aa9.59□□□□□ -0.87
YBX3-212ENST00000542002 TRBV5-4A0A0C4DH59 114 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CCDC162PA2VCL2 907 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 GPR89AB7ZAQ6 455 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 E7EVH7 732 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 H7C0S8 307 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 PGRMC1O00264 195 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 CES2O00748 559 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 KMOO15229 486 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CSO75390 466 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 KRT14P02533 472 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 GPR89BP0CG08 455 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 HOXB3P14651 431 aaPredicted RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 RPL10P27635 214 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 CD1CP29017 333 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ALDH4A1P30038 563 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 MC4RP32245 332 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ACTN2P35609 894 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 LMAN1P49257 510 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 VPS41P49754 854 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CLCNKAP51800 687 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 DRG2P55039 364 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 BASP1P80723 227 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 PDE1BQ01064 536 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CCDC173Q0VFZ6 552 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 GPS1Q13098 491 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ITGA9Q13797 1035 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 SEPT6Q14141 434 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 KCNJ11Q14654 390 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 NR1D2Q14995 579 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CLCA4Q14CN2 919 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 LDLRAP1Q5SW96 308 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 FNBP1LQ5T0N5 605 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 CCDC137Q6PK04 289 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 PPP1R21Q6ZMI0 780 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 SNX20Q7Z614 316 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 CCNJLQ8IV13 435 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 NXPE1Q8N323 547 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 OR6C4Q8NGE1 309 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 STYXQ8WUJ0 223 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 HDAC10Q969S8 669 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ATXN7L3BQ96GX2 97 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 PRR11Q96HE9 360 aaPredicted RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 FOXP3Q9BZS1 431 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 EIF2B3Q9NR50 452 aaKnown RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 KCND1Q9NSA2 647 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ZNF624Q9P2J8 865 aaPredicted RBP9.58□□□□□ -0.88
YBX3-212ENST00000542002 ENTPD2Q9Y5L3 495 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 PRSS21Q9Y6M0 314 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 ASXL3Q9C0F0 2248 aa9.58□□□□□ -0.88
YBX3-212ENST00000542002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
YBX3-212ENST00000542002 IGLV3-16A0A075B6K0 115 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 RHPN2P1A8MT19 583 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 MPOP05164 745 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 F3P13726 295 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 ADRA1DP25100 572 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 HADHAP40939 763 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 SLC19A1P41440 591 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 PTGIRP43119 386 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 MAGEA6P43360 314 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 FASLGP48023 281 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 SESN2P58004 480 aaPredicted RBP9.57□□□□□ -0.88
YBX3-212ENST00000542002 ACVR1Q04771 509 aa9.57□□□□□ -0.88
YBX3-212ENST00000542002 ZFP36L1Q07352 338 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms