RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	DDHD1	Q8NEL9	900 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	PPHLN1	Q8NEY8	458 aa	Known RBP	19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	DTX3L	Q8TDB6	740 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	PATE1	Q8WXA2	126 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	CCDC3	Q9BQI4	270 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	DDX47	Q9H0S4	455 aa	Known RBP	19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	DSP	P15924	2871 aa	Known RBP	19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	SRRM3	A6NNA2	597 aa	Predicted RBP	19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	GPR89A	B7ZAQ6	455 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	OPA1	O60313	960 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	ECEL1	O95672	775 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	GP1BA	P07359	652 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	GPR89B	P0CG08	455 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	ZNF7	P17097	686 aa	Predicted RBP	19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	PBLD	P30039	288 aa	Predicted RBP	19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	PAFAH1B1	P43034	410 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	INSM1	Q01101	510 aa	Predicted RBP	19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	LAMB3	Q13751	1172 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	SKIDA1	Q1XH10	827 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	SNX20	Q7Z614	316 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	PROSER1	Q86XN7	944 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959		Q8N9G6	341 aa	Predicted RBP	19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	MDM1	Q8TC05	714 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	ULK4	Q96C45	1275 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	DCUN1D1	Q96GG9	259 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	LAMA5	O15230	3695 aa		19.37	■□□□□ 0.69
ARF3-208	ENST00000541959	TCRBV7S3A2	A0A539	114 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	OR2AG2	A6NM03	316 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	RHPN2P1	A8MT19	583 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	CHUK	O15111	745 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	TPSB2	P20231	275 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	ADRA1D	P25100	572 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	PPM1F	P49593	454 aa	Predicted RBP	19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	SARNP	P82979	210 aa	Known RBP	19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	TARDBP	Q13148	414 aa	Known RBP eCLIP	19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	TPSAB1	Q15661	275 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	TMEM220	Q6QAJ8	160 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	KLHL7	Q8IXQ5	586 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	OR6C4	Q8NGE1	309 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	NAT14	Q8WUY8	206 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	CDKN2AIPNL	Q96HQ2	116 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	SMOX	Q9NWM0	555 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	BFAR	Q9NZS9	450 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	LRIT1	Q9P2V4	623 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	ASIC3	Q9UHC3	531 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	TCAF1	Q9Y4C2	921 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	RNF215	Q9Y6U7	377 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	CFAP47	Q6ZTR5	3102 aa		19.36	■□□□□ 0.69
ARF3-208	ENST00000541959	OR51F1	A6NGY5	319 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	MT-CO3	P00414	261 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	PRSS56	P0CW18	603 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	RALB	P11234	206 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	VCL	P18206	1134 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	ARSD	P51689	593 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	CTSC	P53634	463 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	CRADD	P78560	199 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	HLTF	Q14527	1009 aa	Known RBP eCLIP	19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	SEPT7	Q16181	437 aa	Known RBP	19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	TSTD2	Q5T7W7	516 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	SYT10	Q6XYQ8	523 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	CREG2	Q8IUH2	290 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	NAGS	Q8N159	534 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	CACTIN-AS1	Q8N1I8	211 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	NXPE1	Q8N323	547 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	ARL14	Q8N4G2	192 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	RASGEF1A	Q8N9B8	481 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	KCND1	Q9NSA2	647 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	FAM8A1	Q9UBU6	413 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	TBC1D29	Q9UFV1	150 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	SLC23A2	Q9UGH3	650 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	SLC2A6	Q9UGQ3	507 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	RABGEF1	Q9UJ41	708 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	CLCA2	Q9UQC9	943 aa		19.35	■□□□□ 0.69
ARF3-208	ENST00000541959	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	MROH6	A6NGR9	719 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	PDZK1P1	A8MUH7	402 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	CFAP99	D6REC4	459 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	GOLGA8M	H3BSY2	632 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	AP3B1	O00203	1094 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	EML2	O95834	649 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	GLB1	P16278	677 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	MGAT1	P26572	445 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	NPY2R	P49146	381 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	CDKN1C	P49918	316 aa	Predicted RBP	19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	PRAME	P78395	509 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	CDK16	Q00536	496 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	CACNG1	Q06432	222 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	CYP4F3	Q08477	520 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	KCNJ11	Q14654	390 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	PCID2	Q5JVF3	399 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	FNBP1L	Q5T0N5	605 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	ANKRD22	Q5VYY1	191 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	SERPINA9	Q86WD7	417 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	ZNF547	Q8IVP9	402 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	OR6P1	Q8NGX9	317 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	HDAC10	Q969S8	669 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	SGF29	Q96ES7	293 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	RANBP9	Q96S59	729 aa		19.34	■□□□□ 0.69
ARF3-208	ENST00000541959	COPS8	Q99627	209 aa		19.34	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms