RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RAB6CQ9H0N0 254 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 CHST8Q9H2A9 424 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 NLRC4Q9NPP4 1024 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 FGF21Q9NSA1 209 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 C5AR2Q9P296 337 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 TBC1D29Q9UFV1 150 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 ARMCX3Q9UH62 379 aaPredicted RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 SH3BGRL2Q9UJC5 107 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 MFHAS1Q9Y4C4 1052 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 HYOU1Q9Y4L1 999 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 SLC30A1Q9Y6M5 507 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 RTTNQ86VV8 2226 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 A0A0U1RQS6 177 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 TSPAN11A1L157 253 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 EPHB6O15197 1021 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 SLC16A3O15427 465 aaKnown RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 KDELR3O43731 214 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 IVLP07476 585 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 GLI1P08151 1106 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 ANKRD34CP0C6C1 535 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 EDN3P14138 238 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 FOLR1P15328 257 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 KLK2P20151 261 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 SUOXP51687 545 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 GEMIN4P57678 1058 aaKnown RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 POLR2FP61218 127 aaKnown RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 LTBQ06643 244 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 KLHL30Q0D2K2 578 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 PTPRRQ15256 657 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHFR-220ENST00000541817 BEND6Q5SZJ8 279 aaPredicted RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 CCDC181Q5TID7 509 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 CACHD1Q5VU97 1274 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 RAET1GQ6H3X3 334 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 OLFML1Q6UWY5 402 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 GBP6Q6ZN66 633 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 Q6ZS92 163 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 RFLNAQ6ZTI6 216 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 MED25Q71SY5 747 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 TTC30BQ8N4P2 665 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 PAF1Q8N7H5 531 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 ZNF606Q8WXB4 792 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 RELTQ969Z4 430 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 SGSM3Q96HU1 749 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 C1orf74Q96LT6 269 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 KREMEN1Q96MU8 473 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 ZNF552Q9H707 407 aaPredicted RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 SARS2Q9NP81 518 aaKnown RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 PLCB1Q9NQ66 1216 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 CNOT8Q9UFF9 292 aaKnown RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 SNX7Q9UNH6 387 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 TFR2Q9UP52 801 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 KCNK6Q9Y257 313 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 SLC17A4Q9Y2C5 497 aa9.62□□□□□ -0.87
CHFR-220ENST00000541817 BZW2Q9Y6E2 419 aaKnown RBP9.62□□□□□ -0.87
CHFR-220ENST00000541817 TRGV8A0A0C4DH27 118 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 FAM72CH0Y354 149 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 CCL21O00585 134 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 MAP2K7O14733 419 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 POLR3GO15318 223 aaPredicted RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 C9P02748 559 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 AMD1P17707 334 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 RGRP47804 291 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 MTA1Q13330 715 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 TUBB3Q13509 450 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 ZNF235Q14590 738 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 IFI16Q16666 785 aaKnown RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 ASTE1Q2TB18 679 aaPredicted RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 PYCR3Q53H96 274 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 HSP90B2PQ58FF3 399 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 FAM72AQ5TYM5 149 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 PRAMEF17Q5VTA0 474 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 FAM72DQ6L9T8 149 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 IYDQ6PHW0 289 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 NLRP14Q86W24 1093 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 FAM72BQ86X60 149 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 FAM131BQ86XD5 332 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 TGIF2LYQ8IUE0 185 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 CEP97Q8IW35 865 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 CBARPQ8N350 705 aaPredicted RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 ZADH2Q8N4Q0 377 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 MMGT1Q8N4V1 131 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 ZNF808Q8N4W9 903 aaPredicted RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 TMEM102Q8N9M5 508 aaPredicted RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 SLC38A9Q8NBW4 561 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 NOA1Q8NC60 698 aaKnown RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 FAR1Q8WVX9 515 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 HDAC11Q96DB2 347 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 COQ10AQ96MF6 247 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 SMR3AQ99954 134 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 MCCC2Q9HCC0 563 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 ASNSD1Q9NWL6 643 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHFR-220ENST00000541817 AIPL1Q9NZN9 384 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 RNF14Q9UBS8 474 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 RARRES3Q9UL19 164 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms