RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 NKTRP30414 1462 aaKnown RBP3.85□□□□□ -1.79
KNTC1-211ENST00000541427 FMN2Q9NZ56 1722 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CHD2O14647 1828 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 IGHV4OR15-8A0A075B7B6 117 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 A0A0G2JPF8 293 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 PGPEP1LA6NFU8 196 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 HNRNPCL3B7ZW38 293 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CLGNO14967 610 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 USO1O60763 962 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 HNRNPCL1O60812 293 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CCNDBP1O95273 360 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 IPO7O95373 1038 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 EIF2S1P05198 315 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 HNRNPCL4P0DMR1 293 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 LAMP2P13473 410 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 HLA-DOBP13765 273 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CD53P19397 219 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 RRM1P23921 792 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CHMP24386 653 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 MAPK4P31152 587 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 NLRP5P59047 1200 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 DCAF7P61962 342 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CSNK2A1P68400 391 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 RELQ04864 619 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 KCNT1Q5JUK3 1230 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 GPATCH4Q5T3I0 446 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 SNX30Q5VWJ9 437 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 FAM122CQ6P4D5 195 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 NCEH1Q6PIU2 408 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 GFRALQ6UXV0 394 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF771Q7L3S4 317 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 TBC1D1Q86TI0 1168 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 FAM9BQ8IZU0 186 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 C1orf87Q8N0U7 546 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 SRBD1Q8N5C6 995 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 ANKRD52Q8NB46 1076 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 CSNK2A3Q8NEV1 391 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 FIG4Q92562 907 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 HDAC2Q92769 488 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 ORAI1Q96D31 301 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 PRAM1Q96QH2 718 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 NAP1L4Q99733 375 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 ITPAQ9BY32 194 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 MUC13Q9H3R2 512 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 PDZD7Q9H5P4 517 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 VDAC3Q9Y277 283 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 MAU2Q9Y6X3 613 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 EDC4Q6P2E9 1401 aaKnown RBP3.84□□□□□ -1.79
KNTC1-211ENST00000541427 SSH2Q76I76 1423 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 ANKARQ7Z5J8 1434 aa3.84□□□□□ -1.79
KNTC1-211ENST00000541427 DENND3A2RUS2 1198 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 GOLGA6L9A6NEM1 432 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 LIPT2A6NK58 231 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 TIPRLO75663 272 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 ITGA2P17301 1181 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 TMPOP42166 694 aaKnown RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 WBP2NLQ6ICG8 309 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 BRAT1Q6PJG6 821 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 UNQ6126/PRO20091Q6UXV3 157 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 C1orf122Q6ZSJ8 110 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 TUBA1AQ71U36 451 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 RSRC2Q7L4I2 434 aaKnown RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 CACNA2D4Q7Z3S7 1137 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 NAGSQ8N159 534 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 NGEFQ8N5V2 710 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 ACVR1CQ8NER5 493 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 LNX1Q8TBB1 728 aaPredicted RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 MAGEC3Q8TD91 643 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 APBB2Q92870 758 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 ARHGEF2Q92974 986 aaKnown RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 ABTB1Q969K4 478 aaPredicted RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 TUBA1CQ9BQE3 449 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 KCNG2Q9UJ96 466 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 ACSL5Q9ULC5 683 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 NUDCQ9Y266 331 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 LOXL2Q9Y4K0 774 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 CGNL1Q0VF96 1302 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 OVOS2A0A0J9YW53 1432 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 OVOS2Q6IE36 1432 aa3.83□□□□□ -1.8
KNTC1-211ENST00000541427 CDK12Q9NYV4 1490 aaPredicted RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 MARF1Q9Y4F3 1742 aaKnown RBP3.83□□□□□ -1.8
KNTC1-211ENST00000541427 TAF1P21675 1872 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 RGPD1P0DJD0 1748 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 PPIP5K1Q6PFW1 1433 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 SERINC4A6NH21 518 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 F5H0A9 414 aaPredicted RBP3.82□□□□□ -1.8
KNTC1-211ENST00000541427 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 SLC25A12O75746 678 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 RNASEH2AO75792 299 aaKnown RBP3.82□□□□□ -1.8
KNTC1-211ENST00000541427 GAS8-AS1O95177 125 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 MYOD1P15172 320 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 HOXC9P31274 260 aa3.82□□□□□ -1.8
KNTC1-211ENST00000541427 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms