RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FRS2Q8WU20 508 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRIM15Q9C019 465 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PAK1IP1Q9NWT1 392 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 A0A0D9SEW6 157 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 RBM47A0AV96 593 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZBBXA8MT70 800 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC22A3O75751 556 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF189O75820 626 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 BCL10O95999 233 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 G6PDP11413 515 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ITGB6P18564 788 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 RGRP47804 291 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PSEN2P49810 448 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 BCAP31P51572 246 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 RAD23AP54725 363 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ARSFP54793 590 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 IL1RL1Q01638 556 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 RCAN2Q14206 197 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PTGR1Q14914 329 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRR23BQ6ZRT6 265 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 GALNT5Q7Z7M9 940 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMEM179BQ7Z7N9 219 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PIANPQ8IYJ0 282 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PHACTR4Q8IZ21 702 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 C10orf111Q8N326 155 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMCO5AQ8N6Q1 288 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PROKR1Q8TCW9 393 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 CALML6Q8TD86 181 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 AURKBQ96GD4 344 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 AMBRA1Q9C0C7 1298 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 MFSD1Q9H3U5 465 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZMYM5Q9UJ78 669 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PCDHB3Q9Y5E6 796 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRIM64A6NGJ6 449 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 MGEA5O60502 916 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 HTR1BP28222 390 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 MTHFRP42898 656 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 HLCSP50747 726 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 TPD52P55327 224 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 BNIP2Q12982 314 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 LCP2Q13094 533 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC14A2Q15849 920 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 UPP1Q16831 310 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC39A12Q504Y0 691 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SGO1Q5FBB7 561 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCNYL2Q5T2Q4 361 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 USP51Q70EK9 711 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SAPCD2Q86UD0 394 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 CROCCP3Q8IVE0 287 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 CNIH3Q8TBE1 160 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 LZICQ8WZA0 190 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 HGH1Q9BTY7 390 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 MRM3Q9HC36 420 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 CSNK1G1Q9HCP0 422 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ATP13A1Q9HD20 1204 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 BBIP1A8MTZ0 92 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 AP3B1O00203 1094 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 FFAR3O14843 346 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 GPR42O15529 346 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC7A4O43246 635 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 MITFO75030 526 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRSS23O95084 383 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 MLYCDO95822 493 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PORP16435 677 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ADAM17P78536 824 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 IFITM3Q01628 133 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 EIF4EBP2Q13542 120 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMEM236Q5W0B7 351 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 LAIR2Q6ISS4 152 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 LETMD1Q6P1Q0 360 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 SPESP1Q6UW49 350 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 OR4K2Q8NGD2 314 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 ADAMTS16Q8TE57 1224 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 EEF1AKMT1Q8WVE0 214 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 FUBP1Q96AE4 644 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 NSMCE2Q96MF7 247 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 DOK1Q99704 481 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 BARD1Q99728 777 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRMOQ9BU70 441 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 HERC2P3Q9BVR0 1158 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 FUNDC2Q9BWH2 189 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 AIG1Q9NVV5 245 aa10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 POLR3HQ9Y535 204 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-207ENST00000540998 C5orf42Q9H799 3197 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 CFAP99D6REC4 459 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ARVCFO00192 962 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 SNX2O60749 519 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 GPIP06744 558 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 IDO1P14902 403 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 POLD2P49005 469 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 MLLT6P55198 1093 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 DGCR6Q14129 220 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 FSCN1Q16658 493 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PTPRNQ16849 979 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PGS1Q32NB8 556 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms