RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PLK4O00444 970 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MID1O15344 667 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 DNAJC6O75061 913 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ADAM23O75077 832 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 KLF8O95600 359 aaPredicted RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 C7P10643 843 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 NEFHP12036 1026 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 HOXB2P14652 356 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 CPA3P15088 417 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 BGNP21810 368 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ALDH3A1P30838 453 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 SKIV2L2P42285 1042 aaKnown RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 RPS14P62263 151 aaKnown RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 IRX4P78413 519 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ACAP2Q15057 778 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ACOX1Q15067 660 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MLF2Q15773 248 aaPredicted RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 SLC44A4Q53GD3 710 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 SETMARQ53H47 684 aaPredicted RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 KIAA1211LQ6NV74 962 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 KLC3Q6P597 504 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MACC1Q6ZN28 852 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF765Q7L2R6 523 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 CPLX4Q7Z7G2 160 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MAML2Q8IZL2 1156 aaPredicted RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 FSTL5Q8N475 847 aaPredicted RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 TMEM151AQ8N4L1 468 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 AADATQ8N5Z0 425 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 TXNDC5Q8NBS9 432 aaKnown RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF473Q8WTR7 871 aaKnown RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 HEXDCQ8WVB3 486 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ANKRD49Q8WVL7 239 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 FAM3CQ92520 227 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 GRAMD1AQ96CP6 724 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 DTD2Q96FN9 168 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 VPS35Q96QK1 796 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 COPS8Q99627 209 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 GPR21Q99679 349 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MRPL57Q9BQC6 102 aaKnown RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 BOCQ9BWV1 1114 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 ABCG8Q9H221 673 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MRPL46Q9H2W6 279 aaKnown RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 MTF2Q9Y483 593 aaPredicted RBP14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 BPTFQ12830 3046 aa14.1□□□□□ -0.15
CYB561A3-216ENST00000540755 A0A1W2PQF6 199 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 TARM1B6A8C7 271 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 E5RI56 91 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 G3V2L1 256 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 NEMP1O14524 444 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 EDF1O60869 148 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 NIPSNAP2O75323 286 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 RBP1P09455 135 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 TECRLQ5HYJ1 363 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 AGBL4Q5VU57 503 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 ATG16L1Q676U5 607 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 PTRHD1Q6GMV3 140 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 ZYG11AQ6WRX3 759 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 NLRP8Q86W28 1048 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 NKAPQ8N5F7 415 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 CXorf40AQ8TE69 158 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 SCAMP4Q969E2 229 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 FAM131CQ96AQ9 280 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 AP2M1Q96CW1 435 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 SCYL1Q96KG9 808 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 WRAP53Q9BUR4 548 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 RIOK2Q9BVS4 552 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 RABEP2Q9H5N1 569 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 CD248Q9HCU0 757 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 FGFR1OP2Q9NVK5 253 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 XPR1Q9UBH6 696 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 TRMT6Q9UJA5 497 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 TMPRSS11EQ9UL52 423 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 PRSS21Q9Y6M0 314 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 R4GN57 208 aa14.09□□□□□ -0.15
CYB561A3-216ENST00000540755 KANSL1LA0AUZ9 987 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 TK2O00142 265 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 MAN2B1O00754 1011 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 TSPAN6O43657 245 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 SBK3P0C264 359 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 MYL2P10916 166 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 FGF3P11487 239 aaPredicted RBP14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 C6P13671 934 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 CD1DP15813 335 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 CHRM3P20309 590 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 KCNA4P22459 653 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 GLRBP48167 497 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 CLCN7P51798 805 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 PRKAA2P54646 552 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 PRKCQQ04759 706 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 DPTQ07507 201 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 CCINQ13939 588 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 CHI3L2Q15782 390 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 EOGTQ5NDL2 527 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 GPRC6AQ5T6X5 926 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 GKAP1Q5VSY0 366 aaPredicted RBP14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 PAQR3Q6TCH7 311 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 C10orf107Q8IVU9 208 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 DDHD1Q8NEL9 900 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 CD200R1Q8TD46 325 aa14.08□□□□□ -0.16
CYB561A3-216ENST00000540755 SREK1Q8WXA9 508 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms