RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TMPRSS11EQ9UL52 423 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 PADI1Q9ULC6 663 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 CHKBQ9Y259 395 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 PCDHB3Q9Y5E6 796 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 AKAP9Q99996 3911 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 SEC16AO15027 2179 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 C1orf232A0A0U1RR37 186 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 PIPSLA2A3N6 862 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 LRRC53A6NM62 1247 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TMCO5BA8MYB1 307 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 MATN3O15232 486 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 VPS4BO75351 444 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 DDAH2O95865 285 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 FTLP02792 175 aaPredicted RBP7.18□□□□□ -1.26
YBX3-209ENST00000540747 MT-ND3P03897 115 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 HLA-DQB2P05538 268 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TPM2P07951 284 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 CD48P09326 243 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 CCDC172P0C7W6 258 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TYRP1P17643 537 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 SEPHS1P49903 392 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 PPP1CAP62136 330 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 UBXN1Q04323 297 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 GPR18Q14330 331 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 NADK2Q4G0N4 442 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 KHDC1Q4VXA5 237 aaKnown RBP7.18□□□□□ -1.26
YBX3-209ENST00000540747 PRR30Q53SZ7 412 aaPredicted RBP7.18□□□□□ -1.26
YBX3-209ENST00000540747 ZNF648Q5T619 568 aaPredicted RBP7.18□□□□□ -1.26
YBX3-209ENST00000540747 NCBP2-AS2Q69YL0 99 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 PWWP2BQ6NUJ5 590 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 PPP1R3BQ86XI6 285 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TICAM1Q8IUC6 712 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 RBM12BQ8IXT5 1001 aaKnown RBP7.18□□□□□ -1.26
YBX3-209ENST00000540747 RNF214Q8ND24 703 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 GPR26Q8NDV2 337 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 LPCAT1Q8NF37 534 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 NSMCE1Q8WV22 266 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 THAP4Q8WY91 577 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 HSPH1Q92598 858 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TADA1Q96BN2 335 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 ZNF653Q96CK0 615 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 FAF2Q96CS3 445 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 GPR87Q9BY21 358 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 OR2AG1Q9H205 316 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 PCDH9Q9HC56 1237 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TRIM39Q9HCM9 518 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 ARFGAP3Q9NP61 516 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 KLC4Q9NSK0 619 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 LNPEPQ9UIQ6 1025 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 VPS4AQ9UN37 437 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 SCINQ9Y6U3 715 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 TNRC6AQ8NDV7 1962 aaKnown RBP7.18□□□□□ -1.26
YBX3-209ENST00000540747 CELSR1Q9NYQ6 3014 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 C2CD3Q4AC94 2353 aa7.18□□□□□ -1.26
YBX3-209ENST00000540747 PCSK5Q92824 1860 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 MTORP42345 2549 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 IGHV5-51A0A0C4DH38 117 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 OR52A4PA6NMU1 304 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 TTLL8A6PVC2 850 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 TCP11X1B4DZS4 312 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 ANKRD66B4E2M5 251 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 KATNA1O75449 491 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 CLDN1O95832 211 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 LDLRP01130 860 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 VIPP01282 170 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 MYBL1P10243 752 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 FOLR1P15328 257 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 ZNF7P17097 686 aaPredicted RBP7.17□□□□□ -1.26
YBX3-209ENST00000540747 LPOP22079 712 aaPredicted RBP7.17□□□□□ -1.26
YBX3-209ENST00000540747 CCNCP24863 283 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 PTPN4P29074 926 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 CASP14P31944 242 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 DCTP40126 519 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 NOP2P46087 812 aaKnown RBP7.17□□□□□ -1.26
YBX3-209ENST00000540747 PGDP52209 483 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 EPHB1P54762 984 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 RPS18P62269 152 aaKnown RBP7.17□□□□□ -1.26
YBX3-209ENST00000540747 MYL5Q02045 173 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 DPYSL3Q14195 570 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 INPP5JQ15735 1006 aaPredicted RBP7.17□□□□□ -1.26
YBX3-209ENST00000540747 ANKRD20A8PQ5CZ79 823 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 ZNF569Q5MCW4 686 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 CACHD1Q5VU97 1274 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 PDPK2PQ6A1A2 396 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 ZNF787Q6DD87 383 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 CERS6Q6ZMG9 384 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 SYVN1Q86TM6 617 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 RASGRP3Q8IV61 690 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 TRAM1L1Q8N609 369 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 PQLC3Q8N755 202 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 EFCAB3Q8N7B9 438 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 CNTD1Q8N815 330 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 SEC14L1Q92503 715 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 UBXN4Q92575 508 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 GLYATL1Q969I3 302 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 TCTN2Q96GX1 697 aa7.17□□□□□ -1.26
YBX3-209ENST00000540747 ELMO2Q96JJ3 720 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms