RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RABIFP47224 123 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 POLD2P49005 469 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 CAV1Q03135 178 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 EIF2B5Q13144 721 aaKnown RBP16.53■□□□□ 0.24
UBC-208ENST00000540700 NFATC2Q13469 925 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 NAA30Q147X3 362 aaPredicted RBP16.53■□□□□ 0.24
UBC-208ENST00000540700 NFATC4Q14934 902 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 PRAMEF14Q5SWL7 426 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 DHRS13Q6UX07 377 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 UNC5AQ6ZN44 842 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 DBX2Q6ZNG2 339 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 FBXO36Q8NEA4 188 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 ZNF398Q8TD17 642 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 PEX13Q92968 403 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 GLYATL1Q969I3 302 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 KLHDC7BQ96G42 594 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 VPS35Q96QK1 796 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 ZSCAN5AQ9BUG6 496 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 CDH19Q9H159 772 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 SAYSD1Q9NPB0 183 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 MRPL40Q9NQ50 206 aaKnown RBP16.53■□□□□ 0.24
UBC-208ENST00000540700 RAD18Q9NS91 495 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 KCTD5Q9NXV2 234 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 MARCH4Q9P2E8 410 aaPredicted RBP16.53■□□□□ 0.24
UBC-208ENST00000540700 NFU1Q9UMS0 254 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 TMEM98Q9Y2Y6 226 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 PCDHGB2Q9Y5G2 931 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 RPS6KL1Q9Y6S9 549 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 KNTC1P50748 2209 aa16.53■□□□□ 0.24
UBC-208ENST00000540700 TRBV5-4A0A0C4DH59 114 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 NDC80O14777 642 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 TNFSF14O43557 240 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 USP1O94782 785 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 HOXC4P09017 264 aaPredicted RBP16.52■□□□□ 0.24
UBC-208ENST00000540700 MYCLP1P12525 358 aaPredicted RBP16.52■□□□□ 0.24
UBC-208ENST00000540700 PGAM1P18669 254 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 KIAA1024LP59773 190 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 YPEL5P62699 121 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 B4GALNT1Q00973 533 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 CRYMQ14894 314 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 SHBQ15464 509 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 ZNF542PQ5EBM4 170 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 ZDHHC20Q5W0Z9 365 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 STEAP4Q687X5 459 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 KIAA0930Q6ICG6 404 aaPredicted RBP16.52■□□□□ 0.24
UBC-208ENST00000540700 NLRP9Q7RTR0 991 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 ZBED8Q8IZ13 594 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 BTN2A2Q8WVV5 523 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 OR1E3Q8WZA6 343 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 CFAP36Q96G28 342 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 HIC2Q96JB3 615 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 TCEAL2Q9H3H9 227 aaPredicted RBP16.52■□□□□ 0.24
UBC-208ENST00000540700 ASB8Q9H765 288 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 FGF22Q9HCT0 170 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 SMOXQ9NWM0 555 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 SAMD15Q9P1V8 674 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 APPL1Q9UKG1 709 aa16.52■□□□□ 0.24
UBC-208ENST00000540700 SPTY2D1-AS1A0A0U1RR47 76 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 SCAMP1O15126 338 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 VAPBO95292 243 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 CEACAM5P06731 702 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 FAM153BP0C7A2 387 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 LAMB3Q13751 1172 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 ERCC6LQ2NKX8 1250 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 ALG11Q2TAA5 492 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 FAM153CQ494X1 144 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 ZRANB3Q5FWF4 1079 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 GPRC6AQ5T6X5 926 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 PDPK2PQ6A1A2 396 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 TRMT10BQ6PF06 316 aaKnown RBP16.51■□□□□ 0.23
UBC-208ENST00000540700 DOK6Q6PKX4 331 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 AFTPHQ6ULP2 937 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 ENPP7Q6UWV6 458 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 MACC1Q6ZN28 852 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 CENPUQ71F23 418 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 SNX20Q7Z614 316 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 ADGRG6Q86SQ4 1221 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 LDB1Q86U70 411 aaPredicted RBP16.51■□□□□ 0.23
UBC-208ENST00000540700 CCDC25Q86WR0 208 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 LRRC39Q96DD0 335 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 PDXPQ96GD0 296 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 C9orf72Q96LT7 481 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 BOCQ9BWV1 1114 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 PHPT1Q9NRX4 125 aaPredicted RBP16.51■□□□□ 0.23
UBC-208ENST00000540700 SLC17A6Q9P2U8 582 aa16.51■□□□□ 0.23
UBC-208ENST00000540700 MAGEB16A2A368 324 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 EIF3HO15372 352 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBC-208ENST00000540700 CLDN6P56747 220 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 GPX6P59796 221 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 IL9RQ01113 521 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 CACNG1Q06432 222 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 OVGP1Q12889 678 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 CUL1Q13616 776 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBC-208ENST00000540700 DBN1Q16643 649 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 SERPINA9Q86WD7 417 aa16.5■□□□□ 0.23
UBC-208ENST00000540700 IFT20Q8IY31 132 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms