RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 OXCT2Q9BYC2 517 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 REEP1Q9H902 201 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 RAB26Q9ULW5 256 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 PSAT1Q9Y617 370 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 RGS14O43566 566 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 SLC22A3O75751 556 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 NADKO95544 446 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ALOX15P16050 662 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 RRM2P31350 389 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 HECTD3Q5T447 861 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 HECTD2Q5U5R9 776 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 PPP4R4Q6NUP7 873 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 MSANTD2Q6P1R3 559 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ACTRT2Q8TDY3 377 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ASB8Q9H765 288 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 TMCO1Q9UM00 188 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 PADI4Q9UM07 663 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 GMPPBQ9Y5P6 360 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 MYOCOSA0A1B0GUC4 107 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 H3BSA7 217 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CD3EAPO15446 510 aaKnown RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ADAM12O43184 909 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 RECQL5O94762 991 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 OR6B1O95007 311 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 HLA-DQB2P05538 268 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ITGAXP20702 1163 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CDH3P22223 829 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 MAPK1P28482 360 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 KCNQ1P51787 676 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CDK18Q07002 472 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 PPP1R8Q12972 351 aaKnown RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ALFQ53S48 1182 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 FGD3Q5JSP0 725 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 IL23RQ5VWK5 629 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 GPRIN3Q6ZVF9 776 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 DENND1CQ8IV53 801 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM132CQ8N3T6 1108 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CNTD1Q8N815 330 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF784Q8NCA9 323 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 UBASH3BQ8TF42 649 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CRISPLD1Q9H336 500 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ALG2Q9H553 416 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 RASSF1Q9NS23 344 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 MOCS1Q9NZB8 636 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 NUMA1Q14980 2115 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 MAFKO60675 156 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 VPS4BO75351 444 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 LINGO3P0C6S8 592 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ADSLP30566 484 aaPredicted RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 PGGT1BP53609 377 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ACSM2AQ08AH3 577 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 HIST2H2ACQ16777 129 aaPredicted RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ACSM2BQ68CK6 577 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 HIST2H2AA3Q6FI13 130 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 CNKSR3Q6P9H4 555 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 GALNT5Q7Z7M9 940 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 SYT12Q8IV01 421 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ARHGAP12Q8IWW6 846 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 PSMG2Q969U7 264 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 IGSF21Q96ID5 467 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 C1orf74Q96LT6 269 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 TSGA13Q96PP4 275 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 MIPEPQ99797 713 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 PAK6Q9NQU5 681 aaPredicted RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 TRPC4Q9UBN4 977 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 CDV3Q9UKY7 258 aaKnown RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 PDZK1P1A8MUH7 402 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 SLC18A2Q05940 514 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF33AQ06730 810 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 BNIP2Q12982 314 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ADGRE1Q14246 886 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 GPNMBQ14956 572 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 EGFLAMQ63HQ2 1017 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 RPS27LQ71UM5 84 aaKnown RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 SVOPQ8N4V2 548 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 NKAPQ8N5F7 415 aaKnown RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 CANT1Q8WVQ1 401 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 ARNTL2Q8WYA1 636 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 TRNAU1APQ9NX07 287 aaKnown RBP9.9□□□□□ -0.82
TRAF1-202ENST00000540010 OGDHLQ9ULD0 1010 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 TTC3P53804 2025 aa9.9□□□□□ -0.82
TRAF1-202ENST00000540010 NUP205Q92621 2012 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 H3BMM5 538 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 J3KR12 359 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 TOR1BO14657 336 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 TACR2P21452 398 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 AQP1P29972 269 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 SEPHS1P49903 392 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 NDST2P52849 883 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 MAD2L1Q13257 205 aaPredicted RBP9.9□□□□□ -0.83
TRAF1-202ENST00000540010 CRY1Q16526 586 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 TCTN1Q2MV58 587 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 STEAP4Q687X5 459 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 ZYG11AQ6WRX3 759 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 FAM9CQ8IZT9 166 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 CPSF7Q8N684 471 aaKnown RBP9.9□□□□□ -0.83
TRAF1-202ENST00000540010 OR6K2Q8NGY2 324 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms