RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CDKL4Q5MAI5 379 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 TTC23LQ6PF05 361 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 CPNE9Q8IYJ1 553 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 KIF2BQ8N4N8 673 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 ZBTB2Q8N680 514 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 CPSF7Q8N684 471 aaKnown RBP16.97■□□□□ 0.31
LTBR-207ENST00000539925 TEX9Q8N6V9 391 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 TERB1Q8NA31 727 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 GIMAP7Q8NHV1 300 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 SORCS1Q8WY21 1168 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 DCUN1D1Q96GG9 259 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 RIPOR3Q96MK2 946 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 SARS2Q9NP81 518 aaKnown RBP16.97■□□□□ 0.31
LTBR-207ENST00000539925 PCDH12Q9NPG4 1184 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 TRAF6Q9Y4K3 522 aa16.97■□□□□ 0.31
LTBR-207ENST00000539925 A0A0U1RQS6 177 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 C16orf96A6NNT2 1141 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 PRR5-ARHGAP8B1AHC4 643 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 NPC1O15118 1278 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 TRIM24O15164 1050 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 RAD51BO15315 384 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 SLC25A14O95258 325 aaPredicted RBP16.96■□□□□ 0.31
LTBR-207ENST00000539925 ENO1P06733 434 aaKnown RBP16.96■□□□□ 0.31
LTBR-207ENST00000539925 RPS17P08708 135 aaKnown RBP16.96■□□□□ 0.31
LTBR-207ENST00000539925 UGT1A6P19224 532 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 UGT1A1P22309 533 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 UGT1A4P22310 534 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 ITGB7P26010 798 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 UGT1A3P35503 534 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 UGT1A5P35504 534 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 ARHGAP8P85298 464 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 HYAL1Q12794 435 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 RUNX3Q13761 415 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 GAB4Q2WGN9 574 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 GPRC6AQ5T6X5 926 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 SYCE2Q6PIF2 218 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 FRA10AC1Q70Z53 315 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 C12orf40Q86WS4 652 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 PARP9Q8IXQ6 854 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 TRAM1L1Q8N609 369 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 AGR3Q8TD06 166 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 MCUR1Q96AQ8 359 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 ELSPBP1Q96BH3 223 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 FAM136AQ96C01 138 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 CCT7Q99832 543 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 FAM126AQ9BYI3 521 aaPredicted RBP16.96■□□□□ 0.31
LTBR-207ENST00000539925 NUF2Q9BZD4 464 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 MEAF6Q9HAF1 191 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 LMCD1Q9NZU5 365 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 SUN2Q9UH99 717 aa16.96■□□□□ 0.31
LTBR-207ENST00000539925 SCN8AQ9UQD0 1980 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 NPEPPSL1A6NEC2 478 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 CDC7O00311 574 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 GIPC1O14908 333 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 VPS4BO75351 444 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 KRT16P08779 473 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 HNRNPLP14866 589 aaKnown RBP eCLIP16.95■□□□□ 0.39e-7■■■■□ 20.6
LTBR-207ENST00000539925 COPAP53621 1224 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 LSM12Q3MHD2 195 aaKnown RBP16.95■□□□□ 0.3
LTBR-207ENST00000539925 ATP13A5Q4VNC0 1218 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 TREML1Q86YW5 311 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 MAPK15Q8TD08 544 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 EXT2Q93063 718 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 SLC30A3Q99726 388 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 NUSAP1Q9BXS6 441 aaKnown RBP16.95■□□□□ 0.3
LTBR-207ENST00000539925 HPS4Q9NQG7 708 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 CD274Q9NZQ7 290 aa16.95■□□□□ 0.3
LTBR-207ENST00000539925 EPOPA6NHQ4 379 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 A8MX80 341 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 B2RBV5 119 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 WFS1O76024 890 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 CTSLP07711 333 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 THRAP10827 490 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 PSMC3P17980 439 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 MMP12P39900 470 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 CLCQ05315 142 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 HERC3Q15034 1050 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 LDLRAP1Q5SW96 308 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 FBXW10Q5XX13 1052 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 TANGO2Q6ICL3 276 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 VITQ6UXI7 678 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 CYP2U1Q7Z449 544 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 LONP2Q86WA8 852 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 VPS35Q96QK1 796 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 BOCQ9BWV1 1114 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 SPATA16Q9BXB7 569 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 RDH14Q9HBH5 336 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 TAS2R1Q9NYW7 299 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 GALPQ9UBC7 116 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 TBC1D3BA6NDS4 549 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 E9PBE3 544 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 C1QTNF3-AMACRE9PGA6 284 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 KLHL41O60662 606 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 TRIM16O95361 564 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 CHEK2O96017 543 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 EEF1DP29692 281 aaKnown RBP16.94■□□□□ 0.3
LTBR-207ENST00000539925 MTHFRP42898 656 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 CCR10P46092 362 aa16.94■□□□□ 0.3
LTBR-207ENST00000539925 PKNOX1P55347 436 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms