RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 BMPERQ8N8U9 685 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 P3H4Q92791 437 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 PMEPA1Q969W9 287 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 ZDHHC12Q96GR4 267 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 SLC45A3Q96JT2 553 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 VPS35Q96QK1 796 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 VAT1Q99536 393 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 CTRCQ99895 268 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 TBC1D10AQ9BXI6 508 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 SLC12A9Q9BXP2 914 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 ARFGAP3Q9NP61 516 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 TUBD1Q9UJT1 453 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 PILRAQ9UKJ1 303 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 MN1Q10571 1320 aaPredicted RBP15.08■□□□□ 0
UBE3B-211ENST00000539843 MGAQ8IWI9 3026 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 C3orf70A6NLC5 250 aaPredicted RBP15.07■□□□□ 0
UBE3B-211ENST00000539843 CHUKO15111 745 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 STK17BO94768 372 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 MT-CYBP00156 380 aaPredicted RBP15.07■□□□□ 0
UBE3B-211ENST00000539843 CSRP3P50461 194 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 UBE2IP63279 158 aaKnown RBP15.07■□□□□ 0
UBE3B-211ENST00000539843 PPP2R5EQ16537 467 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 CCDC181Q5TID7 509 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 KAZNQ674X7 775 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 KLHL35Q6PF15 583 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 CCDC50Q8IVM0 306 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 HTR3CQ8WXA8 447 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 TEKT5Q96M29 485 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 FSD1LQ9BXM9 530 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 TSPY26PQ9H489 355 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 PKP3Q9Y446 797 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 PCDHB3Q9Y5E6 796 aa15.07■□□□□ 0
UBE3B-211ENST00000539843 PCYT1BQ9Y5K3 369 aaPredicted RBP15.07■□□□□ 0
UBE3B-211ENST00000539843 AKR1B15C9JRZ8 316 aaPredicted RBP15.06■□□□□ 0
UBE3B-211ENST00000539843 CST8O60676 142 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 EPOP01588 193 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 BPIP17213 487 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 TYRP1P17643 537 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 WT1P19544 449 aaPredicted RBP15.06■□□□□ 0
UBE3B-211ENST00000539843 COMTP21964 271 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 PTPN3P26045 913 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 HMGCLP35914 325 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 SPAM1P38567 509 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 POLE2P56282 527 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 KCNAB2Q13303 367 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 ITGA9Q13797 1035 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 MAP7Q14244 749 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 PRKD1Q15139 912 aaPredicted RBP15.06■□□□□ 0
UBE3B-211ENST00000539843 TFDP3Q5H9I0 405 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 LDLRAP1Q5SW96 308 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 ZNF648Q5T619 568 aaPredicted RBP15.06■□□□□ 0
UBE3B-211ENST00000539843 MFSD7Q6UXD7 560 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 GLT6D1Q7Z4J2 308 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 RASGRP3Q8IV61 690 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 SPATA22Q8NHS9 363 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 LRRC45Q96CN5 670 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 RBM41Q96IZ5 413 aaKnown RBP15.06■□□□□ 0
UBE3B-211ENST00000539843 C9orf72Q96LT7 481 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 TGM7Q96PF1 710 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 CHP1Q99653 195 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 ULBP3Q9BZM4 244 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 UBP1Q9NZI7 540 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 TMEM184BQ9Y519 407 aaPredicted RBP15.06■□□□□ 0
UBE3B-211ENST00000539843 ADGRG1Q9Y653 693 aa15.06■□□□□ 0
UBE3B-211ENST00000539843 SPTA1P02549 2419 aa15.05■□□□□ 0
UBE3B-211ENST00000539843 CFAP46Q8IYW2 2715 aa15.05■□□□□ 0
UBE3B-211ENST00000539843 MTX2O75431 263 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 ZRANB2O95218 330 aaKnown RBP eCLIP15.05■□□□□ -0
UBE3B-211ENST00000539843 C9P02748 559 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 HLA-DPA1P20036 260 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 TCN2P20062 427 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 CAPZBP47756 277 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 ARSDP51689 593 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 TMEM115Q12893 351 aaPredicted RBP15.05■□□□□ -0
UBE3B-211ENST00000539843 MPP3Q13368 585 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 IL11RAQ14626 422 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 AGAP9Q5VTM2 703 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 ABRAXAS1Q6UWZ7 409 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 WASH2PQ6VEQ5 465 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 PID1Q7Z2X4 250 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 AMZ2Q86W34 360 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 DTX3LQ8TDB6 740 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 BLOC1S5Q8TDH9 187 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 TADA1Q96BN2 335 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 EID2BQ96D98 161 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 STAMBPL1Q96FJ0 436 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 BPIFA1Q9NP55 256 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 WASH6PQ9NQA3 447 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 IL17BQ9UHF5 180 aa15.05■□□□□ -0
UBE3B-211ENST00000539843 GLYATL1P3A0A0U1RQE8 302 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 HACD1B0YJ81 288 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 SUV39H1O43463 412 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 MT-ND3P03897 115 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 CCNYL3P0C7X3 344 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 PRKAR1AP10644 381 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 ITGB6P18564 788 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 NFKB1P19838 968 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 RPL10P27635 214 aaKnown RBP15.04■□□□□ -0
UBE3B-211ENST00000539843 SLC19A1P41440 591 aa15.04■□□□□ -0
UBE3B-211ENST00000539843 CDKN2BP42772 138 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms