RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 BANF1O75531 89 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 GOT2P00505 430 aaKnown RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 PMLP29590 882 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 NPY2RP49146 381 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 NR0B2Q15466 257 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 PCID2Q5JVF3 399 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 LDLRAP1Q5SW96 308 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 TMEM220Q6QAJ8 160 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 EFL1Q7Z2Z2 1120 aaKnown RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 RAB44Q7Z6P3 723 aaPredicted RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 SERPINA9Q86WD7 417 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 NAGSQ8N159 534 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 ARL10Q8N8L6 244 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 MCUQ8NE86 351 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 PPHLN1Q8NEY8 458 aaKnown RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 IFI44Q8TCB0 444 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 ZDHHC1Q8WTX9 485 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 ADAMTS14Q8WXS8 1223 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 ZNF592Q92610 1267 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 MFSD3Q96ES6 412 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 C19orf43Q9BQ61 176 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 TRIM31Q9BZY9 425 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 KLC4Q9NSK0 619 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 TREX1Q9NSU2 369 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 CRLS1Q9UJA2 301 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 PADI4Q9UM07 663 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 DNAJC16Q9Y2G8 782 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 SLC30A1Q9Y6M5 507 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 PTPRBP23467 1997 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 COL27A1Q8IZC6 1860 aaPredicted RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 ASXL3Q9C0F0 2248 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 ASPMQ8IZT6 3477 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 EME2A4GXA9 379 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 PRR19A6NJB7 356 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 RFPL3O75679 317 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 URI1O94763 535 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 ITGALP20701 1170 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 ARNTP27540 789 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 AKT1P31749 480 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 HLTFQ14527 1009 aaKnown RBP eCLIP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 DBN1Q16643 649 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 SKIDA1Q1XH10 827 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 MSS51Q4VC12 460 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 FNBP1LQ5T0N5 605 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 IZUMO3Q5VZ72 239 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 FAM83HQ6ZRV2 1179 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 TAS2R42Q7RTR8 314 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 LDB1Q86U70 411 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 LRRTM4Q86VH4 590 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 C17orf82Q86X59 251 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 TRAPPC5Q8IUR0 188 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 PPIL6Q8IXY8 311 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 SDR16C5Q8N3Y7 309 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 FCRL3Q96P31 734 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 KIFC1Q9BW19 673 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 IL22Q9GZX6 179 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 PRDM8Q9NQV8 689 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 BFARQ9NZS9 450 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 SCHIP1Q9P0W5 487 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 MARCH4Q9P2E8 410 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 KLK13Q9UKR3 277 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 APOBEC2Q9Y235 224 aaKnown RBP15.52■□□□□ 0.08
RPAIN-206ENST00000539417 PRSS21Q9Y6M0 314 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 FRYQ5TBA9 3013 aa15.52■□□□□ 0.08
RPAIN-206ENST00000539417 FAM149AA5PLN7 773 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 A6NCN8 305 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 KMOO15229 486 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 RAD51CO43502 376 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 SNX2O60749 519 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF7P17097 686 aaPredicted RBP15.52■□□□□ 0.07
RPAIN-206ENST00000539417 ACRV1P26436 265 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 PBLDP30039 288 aaPredicted RBP15.52■□□□□ 0.07
RPAIN-206ENST00000539417 MAGEA3P43357 314 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 CACNG1Q06432 222 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 SCG3Q8WXD2 468 aaKnown RBP15.52■□□□□ 0.07
RPAIN-206ENST00000539417 SIGLEC10Q96LC7 697 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 IL1RAPL1Q9NZN1 696 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 CDC23Q9UJX2 597 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 RIMKLBQ9ULI2 386 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 SOX13Q9UN79 622 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 RNF215Q9Y6U7 377 aa15.52■□□□□ 0.07
RPAIN-206ENST00000539417 RP1P56715 2156 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 IGLV3-16A0A075B6K0 115 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 GOLGA8KD6RF30 607 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 GOLGA8TH3BQL2 631 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 OR1I1O60431 355 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 POP7O75817 140 aaKnown RBP15.51■□□□□ 0.07
RPAIN-206ENST00000539417 F7P08709 466 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-206ENST00000539417 MSH3P20585 1137 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 RPL21P46778 160 aaKnown RBP15.51■□□□□ 0.07
RPAIN-206ENST00000539417 INSM1Q01101 510 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-206ENST00000539417 GTF2H3Q13889 308 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 LRP8Q14114 963 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 INSCQ1MX18 579 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 GPR33Q49SQ1 333 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 C14orf28Q4W4Y0 310 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 ARL14Q8N4G2 192 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 LILRA3Q8N6C8 439 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-206ENST00000539417 CLDN19Q8N6F1 224 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms