RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 TTC25Q96NG3 672 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 SLC46A1Q96NT5 459 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 TIMM29Q9BSF4 260 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 TLR10Q9BXR5 811 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 STRADBQ9C0K7 418 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 SEMA6CQ9H3T2 930 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 LRRC40Q9H9A6 602 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 SMOXQ9NWM0 555 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 PIH1D1Q9NWS0 290 aaKnown RBP15.44■□□□□ 0.06
CIT-210ENST00000539413 KCNK4Q9NYG8 393 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 FEZ2Q9UHY8 353 aaPredicted RBP15.44■□□□□ 0.06
CIT-210ENST00000539413 ZNF148Q9UQR1 794 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 ZNF106Q9H2Y7 1883 aaKnown RBP15.44■□□□□ 0.06
CIT-210ENST00000539413 PRR19A6NJB7 356 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 CCL22O00626 93 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 PLD2O14939 933 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 ZW10O43264 779 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 LDB2O43679 373 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 SRP72O76094 671 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 TNFSF15O95150 251 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 AP2A1O95782 977 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 IFNB1P01574 187 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 HGFP14210 728 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 SLC2A4P14672 509 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 ETS1P14921 441 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 ITPKBP27987 946 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 RBMS1P29558 406 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 ZNF140P52738 457 aaPredicted RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 CTSCP53634 463 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 ERVPABLB-1P60509 514 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 XIAPP98170 497 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 PDE1BQ01064 536 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 NFATC2Q13469 925 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 SEPT7Q16181 437 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 PHF19Q5T6S3 580 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 ZNF574Q6ZN55 896 aaPredicted RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 MICALCLQ6ZW33 695 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 FBXO39Q8N4B4 442 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 SLC38A3Q99624 504 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 ZCCHC2Q9C0B9 1178 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 ASB8Q9H765 288 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 SARS2Q9NP81 518 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 THSD1Q9NS62 852 aa15.43■□□□□ 0.06
CIT-210ENST00000539413 SCHIP1Q9P0W5 487 aaPredicted RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 RALYQ9UKM9 306 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 GOLGA4Q13439 2230 aaKnown RBP15.43■□□□□ 0.06
CIT-210ENST00000539413 KIR2DS5A0A0G2JLQ3 304 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 A0A0G2JNG1 304 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 OR2AG2A6NM03 316 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 KIR2DS3K7RE56 304 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 RRP8O43159 456 aaKnown RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 PSMD3O43242 534 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 HOXB3P14651 431 aaPredicted RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 CXCR5P32302 372 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 CSF2RBP32927 897 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 PCBP4P57723 403 aaKnown RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 CFHR1Q03591 330 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 CCDC173Q0VFZ6 552 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 EIF3IQ13347 325 aaKnown RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 KIR2DS5Q14953 304 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 C16orf72Q14CZ0 275 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 SLC9B2Q86UD5 537 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 GLIS1Q8NBF1 620 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 NAF1Q96HR8 494 aaKnown RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 DNAJC1Q96KC8 554 aaKnown RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 FAM96AQ9H5X1 160 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 STN1Q9H668 368 aaKnown RBP15.42■□□□□ 0.06
CIT-210ENST00000539413 ETNK1Q9HBU6 452 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 CPNE7Q9UBL6 633 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 LHX6Q9UPM6 363 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 LOXL2Q9Y4K0 774 aa15.42■□□□□ 0.06
CIT-210ENST00000539413 IGHV5-10-1A0A0J9YXX1 117 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 OR5K4A6NMS3 321 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 AGAP14A8MT82 685 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 PDZK1P1A8MUH7 402 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 CDRT15L2A8MXV6 281 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 CEP104O60308 925 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 POP7O75817 140 aaKnown RBP15.41■□□□□ 0.06
CIT-210ENST00000539413 FGGP02679 453 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 ZSCAN5DPP0CG00 497 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 BRAFP15056 766 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 ITIH1P19827 911 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 MSH3P20585 1137 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 MPSTP25325 297 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 RPL10P27635 214 aaKnown RBP15.41■□□□□ 0.06
CIT-210ENST00000539413 AKT1P31749 480 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 HADHAP40939 763 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 PPM1FP49593 454 aaPredicted RBP15.41■□□□□ 0.06
CIT-210ENST00000539413 DRG2P55039 364 aaKnown RBP15.41■□□□□ 0.06
CIT-210ENST00000539413 UBE2IP63279 158 aaKnown RBP15.41■□□□□ 0.06
CIT-210ENST00000539413 GPLD1P80108 840 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 SQSTM1Q13501 440 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 POU6F1Q14863 301 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 CCNG2Q16589 344 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 CLPPQ16740 277 aaPredicted RBP15.41■□□□□ 0.06
CIT-210ENST00000539413 TMEM220Q6QAJ8 160 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 LRRC69Q6ZNQ3 347 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 DET1Q7L5Y6 550 aa15.41■□□□□ 0.06
CIT-210ENST00000539413 RCBTB1Q8NDN9 531 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms