RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GPR174Q9BXC1 333 aa14□□□□□ -0.17
CD4-208ENST00000538827 SLC17A9Q9BYT1 436 aa14□□□□□ -0.17
CD4-208ENST00000538827 VPS11Q9H270 941 aa14□□□□□ -0.17
CD4-208ENST00000538827 C6orf106Q9H6K1 298 aaPredicted RBP14□□□□□ -0.17
CD4-208ENST00000538827 TMPRSS11EQ9UL52 423 aa14□□□□□ -0.17
CD4-208ENST00000538827 CORO1CQ9ULV4 474 aaPredicted RBP14□□□□□ -0.17
CD4-208ENST00000538827 PIKFYVEQ9Y2I7 2098 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 HMX2A2RU54 273 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 E5RI56 91 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 RAD51BO15315 384 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PHGDHO43175 533 aaKnown RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 NIPSNAP2O75323 286 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 SPAG7O75391 227 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 SLC25A14O95258 325 aaPredicted RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 PAK4O96013 591 aaPredicted RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 SOD1P00441 154 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 IGLV3-19P01714 112 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PYGLP06737 847 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PYGBP11216 843 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 RALBP11234 206 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PKMP14618 531 aaKnown RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 ITGB6P18564 788 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 TYK2P29597 1187 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 CREB5Q02930 508 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 DPTQ07507 201 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 ILF2Q12905 390 aaKnown RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 TAF1BQ53T94 588 aaPredicted RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 CTSL3PQ5NE16 218 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 ZNF549Q6P9A3 640 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 TSSK4Q6SA08 328 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PIM3Q86V86 326 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 CAMKK1Q8N5S9 505 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 FRMD1Q8N878 549 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 DDHD1Q8NEL9 900 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 BTN2A2Q8WVV5 523 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 TSPAN17Q96FV3 270 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 LENG8Q96PV6 779 aaPredicted RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 OLFM1Q99784 485 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 MCMBPQ9BTE3 642 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 C1QTNF2Q9BXJ5 285 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 SARS2Q9NP81 518 aaKnown RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 MBNL1Q9NR56 388 aaKnown RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 WSB2Q9NYS7 404 aaPredicted RBP13.99□□□□□ -0.17
CD4-208ENST00000538827 SENP1Q9P0U3 644 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 DLGAP2Q9P1A6 1054 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PCDHB1Q9Y5F3 818 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 PRSS21Q9Y6M0 314 aa13.99□□□□□ -0.17
CD4-208ENST00000538827 CEP192Q8TEP8 1941 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 K7ESF4 209 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 VPS26AO75436 327 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 ASMTLO95671 621 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 ESR1P03372 595 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 ALDOAP04075 364 aaKnown RBP13.98□□□□□ -0.17
CD4-208ENST00000538827 ADRB1P08588 477 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 BRAFP15056 766 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 STMN1P16949 149 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 KRT4P19013 534 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 RPS3P23396 243 aaKnown RBP eCLIP13.98□□□□□ -0.17
CD4-208ENST00000538827 NSG1P42857 185 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 PGGT1BP53609 377 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 CDKN2DP55273 166 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 TAS2R39P59534 338 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 RAB10P61026 200 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 POU4F1Q01851 419 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 DMWDQ09019 674 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 DNAJC3Q13217 504 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 PDAP1Q13442 181 aaKnown RBP13.98□□□□□ -0.17
CD4-208ENST00000538827 GTF2H3Q13889 308 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 COL9A2Q14055 689 aaPredicted RBP13.98□□□□□ -0.17
CD4-208ENST00000538827 MAP7D1Q3KQU3 841 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 PNCKQ6P2M8 343 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 ADAMTSL4Q6UY14 1074 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 EXOC3L1Q86VI1 746 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 KRT222Q8N1A0 295 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 LKAAEAR1Q8TD35 194 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 DTX3LQ8TDB6 740 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 PKNOX2Q96KN3 472 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 TSNARE1Q96NA8 513 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 RTKNQ9BST9 563 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 ZCCHC2Q9C0B9 1178 aaKnown RBP13.98□□□□□ -0.17
CD4-208ENST00000538827 P2RY12Q9H244 342 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 WDR26Q9H7D7 661 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 KCNK9Q9NPC2 374 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 CA5BQ9Y2D0 317 aa13.98□□□□□ -0.17
CD4-208ENST00000538827 A0A096LPK6 155 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 AGAP14A8MT82 685 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 MEI4A8MW99 385 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 COPEO14579 308 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 RFPL1O75677 317 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 TRIM16O95361 564 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 MPOP05164 745 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CREB1P16220 341 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CHRM3P20309 590 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 NR1D1P20393 614 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 FDXRP22570 491 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 HNRNPA2B1P22626 353 aaKnown RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 PBLDP30039 288 aaPredicted RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 AKT2P31751 481 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 GMPRP36959 345 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms