RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CILP2Q8IUL8 1156 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 B3GALNT2Q8NCR0 500 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 PSMA8Q8TAA3 256 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF566Q969W8 418 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 PGAP3Q96FM1 320 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF300Q96RE9 604 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 RBM4BQ9BQ04 359 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 RBM4Q9BWF3 364 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 COLEC11Q9BWP8 271 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 DSN1Q9H410 356 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 COMMD8Q9NX08 183 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 SNTG2Q9NY99 539 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 DNAJB9Q9UBS3 223 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ADM5C9JUS6 153 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 SNPHO15079 494 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 RFPL2O75678 378 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 KRT75O95678 551 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 NDST3O95803 873 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 INSRRP14616 1297 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 PHC1P78364 1004 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 SLC13A2Q13183 592 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 DCAF4L1Q3SXM0 396 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ARHGAP36Q6ZRI8 547 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 MOB2Q70IA6 237 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 SVOPLQ8N434 492 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 LINC01465Q8N7H1 131 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 OR52K2Q8NGK3 314 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 YIPF6Q96EC8 236 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 NSUN5Q96P11 429 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ALOXE3Q9BYJ1 711 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ASPSCR1Q9BZE9 553 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 BRINP2Q9C0B6 783 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ATXN3LQ9H3M9 355 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 LOC100130705A0A1B0GUX0 176 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 SYCE1LA8MT33 242 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 DFFAO00273 331 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 NOBOXO60393 691 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 UPK1BO75841 260 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 CD1DP15813 335 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 ALDH4A1P30038 563 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 BMPR1AP36894 532 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 UFM1P61960 85 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 LSM3P62310 102 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 DCAF15Q66K64 600 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 VASH1Q7L8A9 365 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 PRSS48Q7RTY5 328 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 LGI2Q8N0V4 545 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 ATPAF2Q8N5M1 289 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 APPL2Q8NEU8 664 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 DHRS1Q96LJ7 313 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 NOL6Q9H6R4 1146 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 ANKHQ9HCJ1 492 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 ERAP1Q9NZ08 941 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 INTS6Q9UL03 887 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 RALGAPA2Q2PPJ7 1873 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 LRRC14BA6NHZ5 514 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 DYRK3O43781 588 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 NR4A2P43354 598 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 PFKFB4Q16877 469 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 CATSPEREQ5SY80 951 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF691Q5VV52 312 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 PRR23BQ6ZRT6 265 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 PIM3Q86V86 326 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 RALGPS2Q86X27 583 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 LYSMD2Q8IV50 215 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 LILRB4Q8NHJ6 448 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 HTRA1Q92743 480 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 MRGPRX2Q96LB1 330 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 SLIRPQ9GZT3 109 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 TP63Q9H3D4 680 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 C3orf18Q9UK00 162 aa18.42■□□□□ 0.54
SFSWAP-207ENST00000538548 GRXCR2A6NFK2 248 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 YJEFN3A6XGL0 299 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 M0QX08 132 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 CLDN5O00501 218 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 MAN1A2O60476 641 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 RYKP34925 604 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 NKX2-5P52952 324 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 IST1P53990 364 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 DMPKQ09013 629 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 LCP2Q13094 533 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 SLX4IPQ5VYV7 408 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 CLEC20AQ6ZU45 233 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 SVOPQ8N4V2 548 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 Q8N9G6 341 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 UGT2B28Q9BY64 529 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 WDCPQ9H6R7 721 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 DNAH12Q6ZR08 3092 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF236Q9UL36 1845 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 AREL1O15033 823 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 CHEK2O96017 543 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 S100BP04271 92 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 GGT1P19440 569 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 GRIK1P39086 918 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 IL18R1Q13478 541 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 DNAJC14Q6Y2X3 702 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 PAGE2Q7Z2X7 111 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms