RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ALPLP05186 524 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 FYNP06241 537 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 YES1P07947 543 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 CYP2C8P10632 490 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 STMN1P16949 149 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 IL1RNP18510 177 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 NELFEP18615 380 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 ATP6V1B2P21281 511 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PCMT1P22061 227 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 IL4RP24394 825 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 HTR1BP28222 390 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 HOXD10P28358 340 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 AXLP30530 894 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ATICP31939 592 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ETV3P41162 512 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PTPN9P43378 593 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 SLC7A2P52569 658 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZNF135P52742 658 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 HSPA2P54652 639 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 GJA9P57773 515 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 SNAP25P60880 206 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 COPZ1P61923 177 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 IFITM3Q01628 133 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 CD300CQ08708 224 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 IKQ13123 557 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 AQP6Q13520 282 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 SMTNL2Q2TAL5 461 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PGS1Q32NB8 556 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PAGE2BQ5JRK9 111 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 TOR1AIP1Q5JTV8 583 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 KCNT1Q5JUK3 1230 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZBTB41Q5SVQ8 909 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ARHGEF16Q5VV41 709 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZNF280DQ6N043 979 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 CASC4Q6P4E1 433 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ISLR2Q6UXK2 745 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 CYP4V2Q6ZWL3 525 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 PDZD4Q76G19 769 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 SLC26A9Q7LBE3 791 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 CATSPER4Q7RTX7 472 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 STRA8Q7Z7C7 330 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZAR1Q86SH2 424 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 P2RY8Q86VZ1 359 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZC3HC1Q86WB0 502 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 SIAH1Q8IUQ4 282 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 KIAA0319LQ8IZA0 1049 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 MPP5Q8N3R9 675 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PCDH20Q8N6Y1 951 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 RNF148Q8N7C7 305 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 AMER2Q8N7J2 671 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 TOR1AIP2Q8NFQ8 470 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 OR6F1Q8NGZ6 308 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PCDH19Q8TAB3 1148 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZFP90Q8TF47 636 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 IPCEF1Q8WWN9 437 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 HTR3CQ8WXA8 447 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 NCLNQ969V3 563 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 TBC1D20Q96BZ9 403 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ACSF2Q96CM8 615 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 TMCO6Q96DC7 493 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 REXO5Q96IC2 774 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 CEP19Q96LK0 163 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 FRMD6Q96NE9 622 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 NECAB3Q96P71 396 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ZNF300Q96RE9 604 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 RBM4BQ9BQ04 359 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 RBM4Q9BWF3 364 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 TRIT1Q9H3H1 467 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 KAT8Q9H7Z6 458 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 SYTL2Q9HCH5 934 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 CCDC59Q9P031 241 aaKnown RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 FAM8A1Q9UBU6 413 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 RAPGEFL1Q9UHV5 662 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 MAGEL2Q9UJ55 1249 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 FEM1BQ9UK73 627 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ITM2BQ9Y287 266 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 TRAPPC4Q9Y296 219 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 ACOT9Q9Y305 439 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PCDHA10Q9Y5I2 948 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 PEX16Q9Y5Y5 336 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 MAU2Q9Y6X3 613 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 AHDC1Q5TGY3 1603 aaPredicted RBP6.65□□□□□ -1.35
USP28-207ENST00000538475 ZSWIM8A7E2V4 1837 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 RALGAPA2Q2PPJ7 1873 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 NUP205Q92621 2012 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PABPN1LA6NDY0 278 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 OR5K3A6NET4 321 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 HMX3A6NHT5 357 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 AGAP5A6NIR3 686 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PDZK1P1A8MUH7 402 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 TMX2-CTNND1H3BSU7 103 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 NME4O00746 187 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 TNPO2O14787 897 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 AURKAO14965 403 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ARPC2O15144 300 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PDPK1O15530 556 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ZW10O43264 779 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ARHGEF9O43307 516 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms