RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LAYNQ6UX15 382 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 FAM151BQ6UXP7 276 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SERPINA9Q86WD7 417 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 TTC16Q8NEE8 873 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 OR56A4Q8NGH8 313 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 FIBINQ8TAL6 211 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 MRPS31Q92665 395 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SPDL1Q96EA4 605 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SLC39A3Q9BRY0 314 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 HGH1Q9BTY7 390 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 ZBP1Q9H171 429 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 COPS7BQ9H9Q2 264 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 CD274Q9NZQ7 290 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 EIF2B4Q9UI10 523 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 INTS6Q9UL03 887 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 DTNAQ9Y4J8 743 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 GPR45Q9Y5Y3 372 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 ST14Q9Y5Y6 855 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 TRBV5-4A0A0C4DH59 114 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 C1orf232A0A0U1RR37 186 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 CARNS1A5YM72 827 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 NR5A2O00482 541 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SNX2O60749 519 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 CLTBP09497 229 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 PIM1P11309 404 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 IDO1P14902 403 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 CD70P32970 193 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 MAPK8P45983 427 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 IRX1P78414 480 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SAMD4BQ5PRF9 694 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SPATA24Q86W54 205 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 TMEM102Q8N9M5 508 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 DCUN1D1Q96GG9 259 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 ZNF382Q96SR6 550 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 PKP2Q99959 881 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 BOCQ9BWV1 1114 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 IL26Q9NPH9 171 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 ABCB8Q9NUT2 735 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 NUDT4Q9NZJ9 180 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 ZNF510Q9Y2H8 683 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 NDUFAF1Q9Y375 327 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 MYOFQ9NZM1 2061 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 FXYD1O00168 92 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CRCPO75575 148 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CTSAP10619 480 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 HNF1BP35680 557 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 PPM1AP35813 382 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ZFP36L2P47974 494 aaKnown RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 SLC7A2P52569 658 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 DIO3P55073 304 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 NFATC2Q13469 925 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 MPPE1Q53F39 396 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 DGKKQ5KSL6 1271 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 TPGS1Q6ZTW0 290 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 SNX20Q7Z614 316 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ZSWIM9Q86XI8 627 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 LKAAEAR1Q8TD35 194 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 LRCH3Q96II8 777 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 LMLNQ96KR4 655 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 LRGUKQ96M69 825 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 KIAA1522Q9P206 1035 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ABCD2Q9UBJ2 740 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 TCRBV3S1A0A5B6 114 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 RNASEH2AO75792 299 aaKnown RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CLDN7O95471 211 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CSF2RAP15509 400 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ZNF7P17097 686 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 BPIP17213 487 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 RHDQ02161 417 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CREMQ03060 361 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 MED21Q13503 144 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 VPS26BQ4G0F5 336 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 FBXL19Q6PCT2 694 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 LILRA6Q6PI73 481 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 BLOC1S3Q6QNY0 202 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 GPRIN3Q6ZVF9 776 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 SPATA19Q7Z5L4 167 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ADAMTSL2Q86TH1 951 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 PHC3Q8NDX5 983 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ADCY4Q8NFM4 1077 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 OR52B6Q8NGF0 335 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 OR2T11Q8NH01 316 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 NAT14Q8WUY8 206 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ATP6V1E2Q96A05 226 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 DUS3LQ96G46 650 aaKnown RBP13.85□□□□□ -0.19
LIMK1-208ENST00000538333 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CIPCQ9C0C6 399 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 CLPBQ9H078 707 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms