RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 LMO7DNF2Z398 122 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 DFNA5O60443 496 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 KCNK5O95279 499 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 TOP3BO95985 862 aaKnown RBP12.91□□□□□ -0.34
CHFR-216ENST00000538235 TNFP01375 233 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 PYGLP06737 847 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 TMEM115Q12893 351 aaPredicted RBP12.91□□□□□ -0.34
CHFR-216ENST00000538235 ANKRD20A4Q4UJ75 823 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 KIAA0930Q6ICG6 404 aaPredicted RBP12.91□□□□□ -0.34
CHFR-216ENST00000538235 SLC30A9Q6PML9 568 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 SLCO6A1Q86UG4 719 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 CLDN19Q8N6F1 224 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 FBXO25Q8TCJ0 367 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
CHFR-216ENST00000538235 SGF29Q96ES7 293 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 APOLD1Q96LR9 279 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 RUNDC3BQ96NL0 473 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 SLC13A1Q9BZW2 595 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 ZDHHC18Q9NUE0 388 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 SCHIP1Q9P0W5 487 aaPredicted RBP12.91□□□□□ -0.34
CHFR-216ENST00000538235 SIRPGQ9P1W8 387 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 SPASTQ9UBP0 616 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 TEX264Q9Y6I9 313 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 FAM237BA0A1B0GVD1 139 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ESPNB1AK53 854 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 H3BM21 787 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 YKT6O15498 198 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 GRID2O43424 1007 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 DKK1O94907 266 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 VAPBO95292 243 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 C1QAP02745 245 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 BRAFP15056 766 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ITGALP20701 1170 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 CSRP1P21291 193 aaKnown RBP12.9□□□□□ -0.34
CHFR-216ENST00000538235 KELP23276 732 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 HADHAP40939 763 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ELK3P41970 407 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 GRK6P43250 576 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ACADVLP49748 655 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 NOVA1P51513 510 aaKnown RBP12.9□□□□□ -0.34
CHFR-216ENST00000538235 MAZP56270 477 aaKnown RBP12.9□□□□□ -0.34
CHFR-216ENST00000538235 CACNG1Q06432 222 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 BBS9Q3SYG4 887 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ZDHHC20Q5W0Z9 365 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 C8orf74Q6P047 294 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 GUSBP11Q6P575 273 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 TRMT10BQ6PF06 316 aaKnown RBP12.9□□□□□ -0.34
CHFR-216ENST00000538235 AFTPHQ6ULP2 937 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 CENPUQ71F23 418 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
CHFR-216ENST00000538235 GALNT13Q8IUC8 556 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ANKMY2Q8IV38 441 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 NAGSQ8N159 534 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 ART4Q93070 314 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 RTKNQ9BST9 563 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 TRNAU1APQ9NX07 287 aaKnown RBP12.9□□□□□ -0.34
CHFR-216ENST00000538235 ZDHHC3Q9NYG2 299 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 NLGN3Q9NZ94 848 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 TAAR2Q9P1P5 351 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 WHRNQ9P202 907 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 TBC1D29Q9UFV1 150 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 CRLS1Q9UJA2 301 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 APPL1Q9UKG1 709 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 GPSM3Q9Y4H4 160 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
CHFR-216ENST00000538235 SDR42E2A6NKP2 422 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 B4DGG1 531 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 PIAS1O75925 651 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 CDK14O94921 469 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 TUBB4AP04350 444 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 AKT1P31749 480 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 ACTR1BP42025 376 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 ACTR1AP61163 376 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 PDE1BQ01064 536 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 CBLBQ13191 982 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 NFE2L1Q14494 772 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 CRYMQ14894 314 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 SKIDA1Q1XH10 827 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 CTSL3PQ5NE16 218 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 TMEM220Q6QAJ8 160 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 NAPRTQ6XQN6 538 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 UNC5AQ6ZN44 842 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 C17orf82Q86X59 251 aaPredicted RBP12.89□□□□□ -0.35
CHFR-216ENST00000538235 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 DENND6AQ8IWF6 608 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 FSTL5Q8N475 847 aaPredicted RBP12.89□□□□□ -0.35
CHFR-216ENST00000538235 GPR156Q8NFN8 814 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 PEX13Q92968 403 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 STAMBPL1Q96FJ0 436 aa12.89□□□□□ -0.35
CHFR-216ENST00000538235 SGSM3Q96HU1 749 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms